Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PARN
  • Mouse genes Parn
  • Rat genes Parn
  • Zfish genes parn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Parn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043169	cation binding	PARN	IMP		Human	PMID:15358788
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PARN	IDA		Human	PMID:25049417
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PARN	IMP		Human	PMID:26482878
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PARN	IMP		Human	PMID:26950371
Molecular Function	GO:0005515	protein binding	PARN	IPI	UniProtKB:Q9H2U1	Human	PMID:14731398
Molecular Function	GO:0005515	protein binding	PARN	IPI	UniProtKB:P33240	Human	PMID:20379136
Molecular Function	GO:0005515	protein binding	PARN	IPI	UniProtKB:Q09161	Human	PMID:20379136
Molecular Function	GO:0005515	protein binding	PARN	IPI	UniProtKB:Q99728	Human	PMID:20379136
Molecular Function	GO:0005515	protein binding	PARN	IPI	UniProtKB:Q7Z2W4	Human	PMID:21876179
Molecular Function	GO:0005515	protein binding	Parn	IPI	UniProtKB:Q9UFF9	Mouse	PMID:18337750
Molecular Function	GO:0005515	protein binding	Parn	IPI	UniProtKB:P78543	Mouse	PMID:18337750
Molecular Function	GO:0019901	protein kinase binding	PARN	IPI	UniProtKB:P49137	Human	PMID:20932473
Molecular Function	GO:0003723	RNA binding	PARN	HDA		Human	PMID:22658674
Cellular Component	GO:0098978	glutamatergic synapse	Parn	IDA		Rat	PMID:22727665|RGD:155230789
Cellular Component	GO:0016607	nuclear speck	PARN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	PARN	IDA		Human	PMID:22442037
Cellular Component	GO:0098794	postsynapse	Parn	IDA		Rat	PMID:22727665|RGD:155230789
Biological Process	GO:0000495	box H/ACA RNA 3'-end processing	PARN	IDA		Human	PMID:22442037
Biological Process	GO:0030097	hemopoiesis	parn	IMP	ZFIN:ZDB-MRPHLNO-160120-4	Zfish	PMID:26342108
Biological Process	GO:0030097	hemopoiesis	parn	IMP	ZFIN:ZDB-MRPHLNO-160120-3	Zfish	PMID:26342108
Biological Process	GO:0010587	miRNA catabolic process	PARN	IDA		Human	PMID:25049417
Biological Process	GO:0110008	ncRNA deadenylation	PARN	IMP		Human	PMID:26482878
Biological Process	GO:0110008	ncRNA deadenylation	PARN	IMP		Human	PMID:26950371
Biological Process	GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	Parn	IDA		Mouse	PMID:18337750
Biological Process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing	PARN	IDA		Human	PMID:22442037
Biological Process	GO:0051973	positive regulation of telomerase activity	PARN	IMP		Human	PMID:26482878
Biological Process	GO:0032212	positive regulation of telomere maintenance via telomerase	PARN	IMP		Human	PMID:26482878
Biological Process	GO:0032212	positive regulation of telomere maintenance via telomerase	PARN	IMP		Human	PMID:26950371
Biological Process	GO:1904872	regulation of telomerase RNA localization to Cajal body	PARN	IMP		Human	PMID:26950371
Biological Process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	PARN	IMP		Human	PMID:26482878
Biological Process	GO:0090669	telomerase RNA stabilization	PARN	IMP		Human	PMID:26482878
Biological Process	GO:0090669	telomerase RNA stabilization	PARN	IMP		Human	PMID:26950371

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern