Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PARVB
  • Mouse genes Parvb
  • Rat genes Parvb
  • Zfish genes parvb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Parvb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PARVB	IPI	UniProtKB:Q8K4I3	Human	PMID:18325335
Molecular Function	GO:0005515	protein binding	PARVB	IPI	UniProtKB:Q9ES28	Human	PMID:18325335
Molecular Function	GO:0005515	protein binding	Parvb	IPI	UniProtKB:O55222	Mouse	MGI:MGI:4367148|PMID:19829382
Molecular Function	GO:0005515	protein binding	Parvb	IPI	UniProtKB:O55222	Mouse	MGI:MGI:4368016|PMID:19798050
Molecular Function	GO:0005515	protein binding	Parvb	IPI	UniProtKB:Q64691	Mouse	MGI:MGI:6383346|PMID:19924298
Molecular Function	GO:0005515	protein binding	Parvb	IPI	UniProtKB:Q9ES28	Mouse	MGI:MGI:5527016|PMID:24035453
Molecular Function	GO:0005515	protein binding	Parvb	IPI	UniProtKB:O55222	Mouse	MGI:MGI:5499269|PMID:23612611
Molecular Function	GO:0005515	protein binding	Parvb	IPI	PR:Q9ESD7	Mouse	PMID:20405035
Cellular Component	GO:0015629	actin cytoskeleton	PARVB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	PARVB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	PARVB	IDA		Human	PMID:22869380
Cellular Component	GO:0030027	lamellipodium	PARVB	IDA		Human	PMID:18325335
Cellular Component	GO:0030018	Z disc	parvb	IDA		Zfish	PMID:16921028
Biological Process	GO:0031532	actin cytoskeleton reorganization	PARVB	IMP		Human	PMID:15005707
Biological Process	GO:0030031	cell projection assembly	PARVB	IMP		Human	PMID:15005707
Biological Process	GO:0007160	cell-matrix adhesion	parvb	IMP	ZFIN:ZDB-MRPHLNO-061220-9	Zfish	PMID:18436206
Biological Process	GO:0071963	establishment or maintenance of cell polarity regulating cell shape	PARVB	IMP		Human	PMID:15005707
Biological Process	GO:0030032	lamellipodium assembly	PARVB	IMP		Human	PMID:18325335
Biological Process	GO:0008016	regulation of heart contraction	parvb	IMP	ZFIN:ZDB-MRPHLNO-061220-9	Zfish	PMID:16921028

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern