Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAX7
  • Mouse genes Pax7
  • Rat genes Pax7
  • Zfish genes pax7a,pax7b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pax7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Pax7	IDA		Mouse	PMID:23070814
Molecular Function	GO:0005515	protein binding	PAX7	IPI	UniProtKB:P46937	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Pax7	IPI	PR:P58501	Mouse	PMID:22862948
Molecular Function	GO:0043565	sequence-specific DNA binding	Pax7	IDA		Mouse	PMID:23070814
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	PAX7	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Pax7	IDA		Mouse	PMID:27434733
Cellular Component	GO:0005634	nucleus	Pax7	IDA		Mouse	PMID:21131290
Cellular Component	GO:0005634	nucleus	Pax7	IDA		Mouse	PMID:22358842
Cellular Component	GO:0005634	nucleus	Pax7	IDA		Mouse	PMID:9230312
Cellular Component	GO:0005634	nucleus	pax7b	IDA		Zfish	PMID:18417109
Cellular Component	GO:0005634	nucleus	pax7a	IDA		Zfish	PMID:18417109
Biological Process	GO:0051216	cartilage development	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:8631261
Biological Process	GO:0006338	chromatin remodeling	Pax7	IMP	MGI:MGI:3047633	Mouse	PMID:23070814
Biological Process	GO:0006338	chromatin remodeling	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:23070814
Biological Process	GO:0048066	developmental pigmentation	pax7a	IMP	ZFIN:ZDB-MRPHLNO-080911-4	Zfish	PMID:18417109
Biological Process	GO:0021904	dorsal/ventral neural tube patterning	Pax7	IDA		Mouse	PMID:18590716
Biological Process	GO:0048706	embryonic skeletal system development	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:8631261
Biological Process	GO:0060415	muscle tissue morphogenesis	Pax7	IGI	MGI:MGI:97252	Mouse	PMID:19531352
Biological Process	GO:0048663	neuron fate commitment	Pax7	IGI	MGI:MGI:97487	Mouse	PMID:9858722
Biological Process	GO:2000288	positive regulation of myoblast proliferation	Pax7	IMP		Mouse	PMID:22862948
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Pax7	IMP		Mouse	PMID:22862948
Biological Process	GO:0010453	regulation of cell fate commitment	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:23070814
Biological Process	GO:0010453	regulation of cell fate commitment	Pax7	IMP	MGI:MGI:3047633	Mouse	PMID:23070814
Biological Process	GO:1902275	regulation of chromatin organization	Pax7	IDA		Mouse	PMID:22862948
Biological Process	GO:1902275	regulation of chromatin organization	Pax7	IGI	MGI:MGI:1914617	Mouse	PMID:22862948
Biological Process	GO:0051101	regulation of DNA binding	Pax7	IMP	MGI:MGI:3047633	Mouse	PMID:23070814
Biological Process	GO:0051101	regulation of DNA binding	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:23070814
Biological Process	GO:0010468	regulation of gene expression	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:23070814
Biological Process	GO:0010468	regulation of gene expression	Pax7	IMP	MGI:MGI:3047633	Mouse	PMID:23070814
Biological Process	GO:0050938	regulation of xanthophore differentiation	pax7b	IGI	ZFIN:ZDB-GENO-160816-19	Zfish	PMID:27053658
Biological Process	GO:0050938	regulation of xanthophore differentiation	pax7a	IGI	ZFIN:ZDB-GENO-160816-19	Zfish	PMID:27053658
Biological Process	GO:0014813	skeletal muscle satellite cell commitment	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:11030621
Biological Process	GO:0007519	skeletal muscle tissue development	Pax7	IMP	MGI:MGI:1857831	Mouse	PMID:11030621
Biological Process	GO:0043403	skeletal muscle tissue regeneration	Pax7	IMP		Mouse	PMID:9608680
Biological Process	GO:0021527	spinal cord association neuron differentiation	Pax7	IGI	MGI:MGI:97487	Mouse	PMID:9858722
Biological Process	GO:0006366	transcription by RNA polymerase II	Pax7	IMP		Mouse	PMID:22862948
Biological Process	GO:0042060	wound healing	pax7b	IGI	ZFIN:ZDB-GENE-990415-201	Zfish	PMID:28279710
Biological Process	GO:0042060	wound healing	pax7a	IGI	ZFIN:ZDB-GENE-080917-54	Zfish	PMID:28279710

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern