Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAX9
  • Mouse genes Pax9
  • Rat genes Pax9
  • Zfish genes pax9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pax9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Pax9	IDA		Mouse	MGI:MGI:5572887|PMID:14607846
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q9UGL1	Human	PMID:12657635
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:A5D8V6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:O00167-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:O43474	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:P31947	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q15645	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q3SY46	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q6P1L6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q8ND83	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q8WY64	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q96N21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q99471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q9NZC7-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PAX9	IPI	UniProtKB:Q9UPG8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pax9	IPI	UniProtKB:Q9ERF6	Mouse	PMID:15721141
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Pax9	IMP		Mouse	MGI:MGI:5572887|PMID:14607846
Molecular Function	GO:0043565	sequence-specific DNA binding	pax9	IDA		Zfish	PMID:8900176
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	PAX9	IDA		Human	PMID:28473536
Cellular Component	GO:0005730	nucleolus	PAX9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PAX9	IDA		Human	GO_REF:0000052
Biological Process	GO:0071363	cellular response to growth factor stimulus	Pax9	IDA		Mouse	PMID:9244299
Biological Process	GO:0007492	endoderm development	Pax9	IMP	MGI:MGI:1857887	Mouse	PMID:11932925
Biological Process	GO:0060325	face morphogenesis	Pax9	IGI	MGI:MGI:97168	Mouse	PMID:20123092
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	PAX9	IDA		Human	PMID:12657635
Biological Process	GO:0042476	odontogenesis	Pax9	IGI	MGI:MGI:97168	Mouse	PMID:20123092
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Pax9	IDA		Mouse	MGI:MGI:5572887|PMID:14607846
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Pax9	IGI	MGI:MGI:108015	Mouse	PMID:15024065
Biological Process	GO:0042481	regulation of odontogenesis	Pax9	IGI	MGI:MGI:97168	Mouse	PMID:20123092
Biological Process	GO:0060021	roof of mouth development	pax9	IMP	ZFIN:ZDB-MRPHLNO-111102-2	Zfish	PMID:22016187

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern