Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAXBP1
  • Mouse genes Paxbp1
  • Rat genes Paxbp1
  • Zfish genes paxbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Paxbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1990226	histone methyltransferase binding	Paxbp1	IPI	PR:P61965	Mouse	PMID:22862948
Molecular Function	GO:0008134	transcription factor binding	Paxbp1	IPI	PR:P47239	Mouse	PMID:22862948
Molecular Function	GO:0008134	transcription factor binding	Paxbp1	IPI	PR:P24610	Mouse	PMID:22862948
Cellular Component	GO:0005829	cytosol	PAXBP1	HDA		Human	PMID:16780588
Cellular Component	GO:0005634	nucleus	Paxbp1	IDA		Mouse	PMID:22862948
Biological Process	GO:2000288	positive regulation of myoblast proliferation	Paxbp1	IMP		Mouse	PMID:22862948
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Paxbp1	IMP		Mouse	PMID:22862948
Biological Process	GO:0014842	regulation of skeletal muscle satellite cell proliferation	Paxbp1	IMP		Mouse	PMID:22862948
Biological Process	GO:0006366	transcription by RNA polymerase II	Paxbp1	IMP		Mouse	PMID:22862948

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern