Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Pbx4

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes PBX4
- Mouse genes Pbx4
- Rat genes Pbx4
- Zfish genes pbx4
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pbx4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	pbx4	IDA		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Molecular Function	GO:0003700	DNA-binding transcription factor activity	pbx4	IDA		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O94829	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O94829	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UBB9	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O94829	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:A0A024R8A9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:A0A384ME25	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:C9JCN9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O00303	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O14530	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O14770-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O43639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O60341	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O60437	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O94829	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O95872	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:O95983-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P09016	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P09067	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P0CB47	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P14652	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P31273	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P41182	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P42773	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P45984	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P51800-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P55040	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P55347	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P61970	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P62877	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q00444	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q0D2K3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q13515	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q2WGJ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q5MJ09	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q5MJ10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q5TAB7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8IY31-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8IYI6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8N6Y0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8N9N8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8TAE8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8TD10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8WV44	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8WW01	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q8WWB5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q92569	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q96A72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q96GM5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q96KN3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q96PN8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9BRT9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9BWG6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9HC98-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NR81	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NUG4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NWQ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NX04	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NZC7-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UBL6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UHV2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9UNF0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9Y3S2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9Y6H1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P35637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q00403	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q01658	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PBX4	IPI	UniProtKB:Q9Y5Q9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	pbx4	IPI	UniProtKB:Q90ZE3	Zfish	PMID:11262231\|ZFIN:ZDB-PUB-010404-7
Molecular Function	GO:0005515	protein binding	pbx4	IPI	ZFIN:ZDB-GENE-020122-1	Zfish	PMID:11684652
Molecular Function	GO:0043565	sequence-specific DNA binding	Pbx4	IDA		Mouse	MGI:MGI:3777519\|PMID:17875925
Cellular Component	GO:0005634	nucleus	pbx4	IDA		Zfish	PMID:10983974
Cellular Component	GO:0001741	XY body	Pbx4	IDA		Mouse	PMID:11335119
Biological Process	GO:0007411	axon guidance	pbx4	IDA		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Biological Process	GO:0007420	brain development	pbx4	IMP		Zfish	PMID:12431378
Biological Process	GO:0003232	bulbus arteriosus development	pbx4	IMP	ZFIN:ZDB-GENO-170117-1	Zfish	PMID:26770887
Biological Process	GO:0055007	cardiac muscle cell differentiation	pbx4	IGI	ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-2,ZFIN:ZDB-MRPHLNO-070529-3,ZFIN:ZDB-MRPHLNO-070529-4	Zfish	PMID:19607825
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	pbx4	IMP	ZFIN:ZDB-GENO-030327-1	Zfish	PMID:11684652
Biological Process	GO:0060059	embryonic retina morphogenesis in camera-type eye	pbx4	IGI	ZFIN:ZDB-GENO-071026-2,ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-3	Zfish	PMID:17634100
Biological Process	GO:0007507	heart development	pbx4	IMP	ZFIN:ZDB-GENO-170117-1	Zfish	PMID:26770887
Biological Process	GO:0003007	heart morphogenesis	pbx4	IMP	ZFIN:ZDB-GENO-170117-1	Zfish	PMID:26770887
Biological Process	GO:0003007	heart morphogenesis	pbx4	IGI	ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-2,ZFIN:ZDB-MRPHLNO-070529-3,ZFIN:ZDB-MRPHLNO-070529-4,ZFIN:ZDB-MRPHLNO-080930-4	Zfish	PMID:19607825
Biological Process	GO:0003007	heart morphogenesis	pbx4	IGI	ZFIN:ZDB-GENO-190422-5	Zfish	PMID:30355621
Biological Process	GO:0003007	heart morphogenesis	pbx4	IGI	ZFIN:ZDB-GENO-190422-4	Zfish	PMID:30355621
Biological Process	GO:0030902	hindbrain development	pbx4	IGI	ZFIN:ZDB-GENE-010406-2	Zfish	PMID:11262231\|ZFIN:ZDB-PUB-010404-7
Biological Process	GO:0030901	midbrain development	pbx4	IGI	ZFIN:ZDB-GENO-071026-2,ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-3	Zfish	PMID:17634100
Biological Process	GO:0031061	negative regulation of histone methylation	pbx4	IGI	ZFIN:ZDB-GENE-020122-5	Zfish	PMID:24480644
Biological Process	GO:0001755	neural crest cell migration	pbx4	IMP	ZFIN:ZDB-GENO-071026-2	Zfish	PMID:15882579
Biological Process	GO:0048666	neuron development	pbx4	IMP	ZFIN:ZDB-GENO-030327-1	Zfish	PMID:11684652
Biological Process	GO:0030182	neuron differentiation	pbx4	IMP		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Biological Process	GO:0001764	neuron migration	pbx4	IDA		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Biological Process	GO:0031016	pancreas development	pbx4	IMP	ZFIN:ZDB-GENO-071026-2	Zfish	PMID:17289013
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	pbx4	IGI	ZFIN:ZDB-GENE-010406-2	Zfish	PMID:11262231\|ZFIN:ZDB-PUB-010404-7
Biological Process	GO:0035066	positive regulation of histone acetylation	pbx4	IGI	ZFIN:ZDB-GENE-020122-5	Zfish	PMID:24480644
Biological Process	GO:0035066	positive regulation of histone acetylation	pbx4	IGI	ZFIN:ZDB-GENE-010406-2	Zfish	PMID:24480644
Biological Process	GO:0035066	positive regulation of histone acetylation	pbx4	IGI	ZFIN:ZDB-GENE-020122-5,ZFIN:ZDB-GENE-980526-290	Zfish	PMID:24480644
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	pbx4	IGI	ZFIN:ZDB-GENE-010406-2	Zfish	PMID:11262231\|ZFIN:ZDB-PUB-010404-7
Biological Process	GO:0003342	proepicardium development	pbx4	IMP	ZFIN:ZDB-GENO-170117-1	Zfish	PMID:26770887
Biological Process	GO:0006355	regulation of DNA-templated transcription	pbx4	IMP		Zfish	PMID:12645925\|ZFIN:ZDB-PUB-030325-2
Biological Process	GO:0031060	regulation of histone methylation	pbx4	IGI	ZFIN:ZDB-GENE-020122-5,ZFIN:ZDB-GENE-980526-290	Zfish	PMID:24480644
Biological Process	GO:0048741	skeletal muscle fiber development	pbx4	IGI	ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-2,ZFIN:ZDB-MRPHLNO-070529-3,ZFIN:ZDB-MRPHLNO-070529-4	Zfish	PMID:17699609
Biological Process	GO:0048741	skeletal muscle fiber development	pbx4	IGI	ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-2,ZFIN:ZDB-MRPHLNO-070529-3,ZFIN:ZDB-MRPHLNO-070529-4,ZFIN:ZDB-MRPHLNO-071210-2,ZFIN:ZDB-MRPHLNO-071210-3	Zfish	PMID:17699609
Biological Process	GO:0048741	skeletal muscle fiber development	pbx4	IGI	ZFIN:ZDB-GENE-980526-166,ZFIN:ZDB-MRPHLNO-070529-1,ZFIN:ZDB-MRPHLNO-070529-2,ZFIN:ZDB-MRPHLNO-070529-3,ZFIN:ZDB-MRPHLNO-070529-4	Zfish	PMID:17699609

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 10/01/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.