Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PBXIP1
  • Mouse genes Pbxip1
  • Rat genes Pbxip1
  • Zfish genes pbxip1a,pbxip1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pbxip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140297	DNA-binding transcription factor binding	PBXIP1	IPI	UniProtKB:P40424	Human	PMID:10825160
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9Y3C0	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q99750	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9Y3C0	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:P24863	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9H4E7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9UBU8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9UBU8-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9UER7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q99750	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:O43765	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q99750	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9Y3C0	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:O95447	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:P49069	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:P60371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q8NI37	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q96IK5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PBXIP1	IPI	UniProtKB:Q9H0R8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pbxip1	IPI	PR:P27782	Mouse	PMID:30659184
Molecular Function	GO:0005515	protein binding	Pbxip1	IPI	PR:Q02248	Mouse	PMID:30659184
Molecular Function	GO:0005515	protein binding	Pbxip1	IPI	PR:B2RWS6	Mouse	PMID:30659184
Molecular Function	GO:0003713	transcription coactivator activity	Pbxip1	IDA		Mouse	PMID:30659184
Molecular Function	GO:0003713	transcription coactivator activity	Pbxip1	IMP	MGI:MGI:6363078	Mouse	PMID:30659184
Molecular Function	GO:0003714	transcription corepressor activity	PBXIP1	IDA		Human	PMID:10825160
Cellular Component	GO:0000785	chromatin	Pbxip1	IDA		Mouse	PMID:30659184
Cellular Component	GO:0005737	cytoplasm	Pbxip1	IDA		Mouse	PMID:30659184
Cellular Component	GO:0005737	cytoplasm	Pbxip1	IPI	PR:Q02248	Mouse	PMID:30659184
Cellular Component	GO:0005829	cytosol	PBXIP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	PBXIP1	IDA		Human	PMID:10825160
Cellular Component	GO:0005654	nucleoplasm	PBXIP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PBXIP1	IDA		Human	PMID:10825160
Cellular Component	GO:0005634	nucleus	Pbxip1	IPI	PR:P27782	Mouse	PMID:30659184
Cellular Component	GO:0005634	nucleus	Pbxip1	IDA		Mouse	PMID:30659184
Cellular Component	GO:0005634	nucleus	Pbxip1	IPI	PR:Q02248	Mouse	PMID:30659184
Cellular Component	GO:0005667	transcription regulator complex	Pbxip1	IDA		Mouse	PMID:30659184
Biological Process	GO:0061975	articular cartilage development	Pbxip1	IMP	MGI:MGI:3665440,MGI:MGI:6363079	Mouse	PMID:30659184
Biological Process	GO:0061975	articular cartilage development	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0061975	articular cartilage development	Pbxip1	IMP	MGI:MGI:6363078	Mouse	PMID:30659184
Biological Process	GO:0007155	cell adhesion	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0016477	cell migration	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0022617	extracellular matrix disassembly	Pbxip1	IMP	MGI:MGI:3665440,MGI:MGI:6363079	Mouse	PMID:30659184
Biological Process	GO:0010467	gene expression	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0010467	gene expression	Pbxip1	IMP	MGI:MGI:3665440,MGI:MGI:6363079	Mouse	PMID:30659184
Biological Process	GO:1901148	gene expression involved in extracellular matrix organization	Pbxip1	IMP	MGI:MGI:3665440,MGI:MGI:6363079	Mouse	PMID:30659184
Biological Process	GO:1901148	gene expression involved in extracellular matrix organization	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0030097	hemopoiesis	PBXIP1	IEP		Human	PMID:10825160
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	PBXIP1	IDA		Human	PMID:10825160
Biological Process	GO:1902732	positive regulation of chondrocyte proliferation	Pbxip1	IMP	MGI:MGI:6363078	Mouse	PMID:30659184
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Pbxip1	IDA		Mouse	PMID:30659184
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Pbxip1	IMP	MGI:MGI:6363078	Mouse	PMID:30659184
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	Pbxip1	IMP	MGI:MGI:6363078	Mouse	PMID:30659184
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	Pbxip1	IDA		Mouse	PMID:30659184
Biological Process	GO:0002532	production of molecular mediator involved in inflammatory response	Pbxip1	IMP		Mouse	PMID:30659184
Biological Process	GO:0002532	production of molecular mediator involved in inflammatory response	Pbxip1	IMP	MGI:MGI:3665440,MGI:MGI:6363079	Mouse	PMID:30659184

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern