Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Pcdh15

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes PCDH15
- Mouse genes Pcdh15
- Rat genes Pcdh15
- Zfish genes pcdh15a,pcdh15b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcdh15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q8R4P4\|UniProtKB:Q8R4P5	Mouse	MGI:MGI:5604056\|PMID:25114259
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:A1Y9I9	Mouse	MGI:MGI:6100205\|PMID:28504928
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q9ES64-3	Mouse	MGI:MGI:3619622\|PMID:16301216
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q99PF4-1	Mouse	MGI:MGI:3839497\|PMID:19270079
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q99PF4-1	Mouse	MGI:MGI:5466625\|PMID:23135401
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q99PF4-1	Mouse	MGI:MGI:3758173\|PMID:17805295
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q9ES64-3\|UniProtKB:Q9ES64	Mouse	MGI:MGI:3583725\|PMID:15928608
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	UniProtKB:Q99PF4-1	Mouse	MGI:MGI:5915196\|PMID:20498078
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	PR:P97479	Mouse	PMID:16481439
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	PR:Q4KL25	Mouse	PMID:23217710
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	PR:Q9ES64	Mouse	PMID:16481439
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	PR:Q9ES64	Mouse	PMID:15590703
Molecular Function	GO:0005515	protein binding	Pcdh15	IPI	RGD:620688	Rat	PMID:22948144\|RGD:9686140
Molecular Function	GO:0005515	protein binding	pcdh15a	IPI	UniProtKB:E7FFT2	Zfish	PMID:25114259\|ZFIN:ZDB-PUB-140813-4
Cellular Component	GO:0005737	cytoplasm	Pcdh15	IDA		Mouse	PMID:16481439
Cellular Component	GO:0001750	photoreceptor outer segment	PCDH15	IDA		Human	PMID:14570705
Cellular Component	GO:0001750	photoreceptor outer segment	Pcdh15	IDA		Mouse	PMID:14570705
Cellular Component	GO:0005886	plasma membrane	Pcdh15	IDA		Mouse	PMID:23217710
Cellular Component	GO:0032420	stereocilium	Pcdh15	IDA		Mouse	MGI:MGI:3722521\|PMID:14570705
Cellular Component	GO:0032420	stereocilium	Pcdh15	EXP		Mouse	PMID:26754646
Cellular Component	GO:0045202	synapse	PCDH15	IDA		Human	PMID:11487575
Biological Process	GO:0007015	actin filament organization	Pcdh15	IMP	MGI:MGI:1855958	Mouse	PMID:11124469
Biological Process	GO:0007015	actin filament organization	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:11124469
Biological Process	GO:0007015	actin filament organization	Pcdh15	IMP	MGI:MGI:1856396	Mouse	PMID:11124469
Biological Process	GO:0008344	adult locomotory behavior	Pcdh15	IMP	MGI:MGI:1855958	Mouse	MGI:MGI:76231
Biological Process	GO:0008344	adult locomotory behavior	Pcdh15	IMP	MGI:MGI:1856394	Mouse	MGI:MGI:76231
Biological Process	GO:0007628	adult walking behavior	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:11124469
Biological Process	GO:0007628	adult walking behavior	Pcdh15	IMP	MGI:MGI:1855958	Mouse	PMID:11124469
Biological Process	GO:0007628	adult walking behavior	Pcdh15	IMP	MGI:MGI:1856396	Mouse	PMID:11124469
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:1855958	Mouse	PMID:11124469
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:23217710
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:1856396	Mouse	PMID:11124469
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IGI	MGI:MGI:1890219	Mouse	PMID:15537665
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:11124469
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:3505691	Mouse	PMID:16887306
Biological Process	GO:0060271	cilium assembly	pcdh15a	IGI	ZFIN:ZDB-MRPHLNO-150211-6,ZFIN:ZDB-MRPHLNO-180405-2,ZFIN:ZDB-MRPHLNO-180405-3	Zfish	PMID:28883094
Biological Process	GO:0060271	cilium assembly	pcdh15a	IMP	ZFIN:ZDB-MRPHLNO-150211-6	Zfish	PMID:28883094
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	pcdh15b	IMP	ZFIN:ZDB-MRPHLNO-050215-2	Zfish	PMID:15634702
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	pcdh15b	IMP	ZFIN:ZDB-MRPHLNO-050215-1	Zfish	PMID:15634702
Biological Process	GO:0050973	detection of mechanical stimulus involved in equilibrioception	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:16481439
Biological Process	GO:0050974	detection of mechanical stimulus involved in sensory perception	pcdh15a	IMP		Zfish	PMID:9491988
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:16481439
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	pcdh15a	IGI	ZFIN:ZDB-GENO-150116-4	Zfish	PMID:25114259
Biological Process	GO:0006897	endocytosis	pcdh15a	IMP		Zfish	PMID:10526320
Biological Process	GO:0050957	equilibrioception	PCDH15	IMP		Human	PMID:16679490
Biological Process	GO:0001654	eye development	pcdh15b	IMP	ZFIN:ZDB-MRPHLNO-050215-1	Zfish	PMID:15634702
Biological Process	GO:0001654	eye development	pcdh15b	IMP	ZFIN:ZDB-MRPHLNO-050215-2	Zfish	PMID:15634702
Biological Process	GO:0035315	hair cell differentiation	pcdh15a	IMP		Zfish	PMID:10526320
Biological Process	GO:0042491	inner ear auditory receptor cell differentiation	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:16481439
Biological Process	GO:0048839	inner ear development	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:0048839	inner ear development	Pcdh15	IMP	MGI:MGI:2183469	Mouse	PMID:15811708
Biological Process	GO:0048839	inner ear development	Pcdh15	IMP	MGI:MGI:1855958	Mouse	PMID:10978835
Biological Process	GO:0060122	inner ear receptor cell stereocilium organization	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:18339676
Biological Process	GO:0007626	locomotory behavior	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:0007626	locomotory behavior	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10430593
Biological Process	GO:0007626	locomotory behavior	Pcdh15	IMP	MGI:MGI:2183469	Mouse	PMID:15811708
Biological Process	GO:0007626	locomotory behavior	Pcdh15	IMP	MGI:MGI:2183469	Mouse	PMID:16962269
Biological Process	GO:0002009	morphogenesis of an epithelium	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:11138007
Biological Process	GO:0035264	multicellular organism growth	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:1905515	non-motile cilium assembly	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:16481439
Biological Process	GO:0045494	photoreceptor cell maintenance	PCDH15	IMP		Human	PMID:11398101
Biological Process	GO:0051592	response to calcium ion	Pcdh15	IDA		Rat	PMID:19008224\|RGD:9686142
Biological Process	GO:0060013	righting reflex	Pcdh15	IMP	MGI:MGI:2183469	Mouse	PMID:15811708
Biological Process	GO:0060013	righting reflex	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:0007423	sensory organ development	pcdh15a	IMP	ZFIN:ZDB-GENO-980410-300	Zfish	PMID:15634702
Biological Process	GO:0007423	sensory organ development	pcdh15a	IMP	ZFIN:ZDB-GENO-980410-241	Zfish	PMID:15634702
Biological Process	GO:0050953	sensory perception of light stimulus	PCDH15	IMP		Human	PMID:11398101
Biological Process	GO:0007605	sensory perception of sound	PCDH15	IMP		Human	PMID:15537665
Biological Process	GO:0007605	sensory perception of sound	PCDH15	IMP		Human	PMID:11398101
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP		Mouse	PMID:14570705
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10978835
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:11124469
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856467	Mouse	PMID:5093631
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1855958	Mouse	PMID:11124469
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856396	Mouse	PMID:11124469
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IGI	MGI:MGI:1890219	Mouse	PMID:15537665
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856467	Mouse	PMID:9653653
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856394	Mouse	PMID:16481439
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:2151877	Mouse	PMID:10430593
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1855958	Mouse	MGI:MGI:76231
Biological Process	GO:0007605	sensory perception of sound	Pcdh15	IMP	MGI:MGI:1856394	Mouse	MGI:MGI:76231
Biological Process	GO:0001964	startle response	Pcdh15	IMP	MGI:MGI:2183469	Mouse	PMID:15811708
Biological Process	GO:0007601	visual perception	Pcdh15	IMP	MGI:MGI:2448714	Mouse	PMID:16799054

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.