Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCID2
  • Mouse genes Pcid2
  • Rat genes Pcid2
  • Zfish genes pcid2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcid2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PCID2	IPI	UniProtKB:O15182,UniProtKB:O60318,UniProtKB:P41208,UniProtKB:Q9NPA8	Human	PMID:23591820
Molecular Function	GO:0005515	protein binding	PCID2	IPI	UniProtKB:Q9UKT9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCID2	IPI	UniProtKB:P60896	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCID2	IPI	UniProtKB:Q96PV6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pcid2	IPI	UniProtKB:Q8R331	Mouse	MGI:MGI:6106288|PMID:29138493
Cellular Component	GO:0005737	cytoplasm	PCID2	IDA		Human	PMID:23591820
Cellular Component	GO:0044615	nuclear pore nuclear basket	PCID2	IDA		Human	PMID:23591820
Cellular Component	GO:0005634	nucleus	PCID2	IDA		Human	PMID:23591820
Cellular Component	GO:0070390	transcription export complex 2	PCID2	IDA		Human	PMID:23591820
Biological Process	GO:0070828	heterochromatin organization	Pcid2	IMP		Mouse	MGI:MGI:6106288|PMID:29138493
Biological Process	GO:0043066	negative regulation of apoptotic process	PCID2	IMP		Human	PMID:20870947
Biological Process	GO:0043066	negative regulation of apoptotic process	Pcid2	IMP		Mouse	MGI:MGI:4839685|PMID:20870947
Biological Process	GO:2000117	negative regulation of cysteine-type endopeptidase activity	PCID2	IMP		Human	PMID:20870947
Biological Process	GO:1905457	negative regulation of lymphoid progenitor cell differentiation	Pcid2	IMP		Mouse	MGI:MGI:6106288|PMID:29138493
Biological Process	GO:0060633	negative regulation of transcription initiation by RNA polymerase II	Pcid2	IMP		Mouse	MGI:MGI:6106288|PMID:29138493
Biological Process	GO:0045579	positive regulation of B cell differentiation	Pcid2	IMP		Mouse	MGI:MGI:4839685|PMID:20870947
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	PCID2	IMP		Human	PMID:20870947
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Pcid2	IMP		Mouse	MGI:MGI:4839685|PMID:20870947
Biological Process	GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	PCID2	IMP		Human	PMID:20870947
Biological Process	GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	Pcid2	IMP		Mouse	MGI:MGI:4839685|PMID:20870947
Biological Process	GO:0043488	regulation of mRNA stability	PCID2	IMP		Human	PMID:20870947
Biological Process	GO:0048536	spleen development	Pcid2	IMP		Mouse	MGI:MGI:4839685|PMID:20870947

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern