Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCMT1
  • Mouse genes Pcmt1
  • Rat genes Pcmt1
  • Zfish genes pcmt
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcmt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	PCMT1	HDA		Human	PMID:25468996
Molecular Function	GO:0005515	protein binding	PCMT1	IPI	UniProtKB:P49247	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCMT1	IPI	UniProtKB:Q13155	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCMT1	IPI	UniProtKB:P0DTD1:PRO_0000449623	Human	PMID:32838362
Molecular Function	GO:0005515	protein binding	PCMT1	IPI	UniProtKB:P0DTD1:PRO_0000449623	Human	PMID:34232536
Molecular Function	GO:0005515	protein binding	Pcmt1	IPI	RGD:3114	Rat	PMID:23647599|RGD:10448278
Molecular Function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	PCMT1	IDA		Human	PMID:3167043
Molecular Function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	Pcmt1	IDA		Mouse	PMID:12023972
Molecular Function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	Pcmt1	IDA		Rat	PMID:8263531|RGD:729481
Molecular Function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	pcmt	IDA		Zfish	PMID:33552132
Molecular Function	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Pcmt1	IDA		Rat	PMID:8263531|RGD:729481
Cellular Component	GO:0016323	basolateral plasma membrane	Pcmt1	IDA		Rat	PMID:7639720|RGD:10448282
Cellular Component	GO:0031526	brush border membrane	Pcmt1	IDA		Rat	PMID:7639720|RGD:10448282
Cellular Component	GO:0005737	cytoplasm	Pcmt1	IDA		Rat	PMID:23647599|RGD:10448278
Cellular Component	GO:0005829	cytosol	PCMT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	Pcmt1	IDA		Rat	PMID:7639720|RGD:10448282
Cellular Component	GO:0070062	extracellular exosome	PCMT1	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	Pcmt1	IDA		Rat	PMID:9188065|RGD:10448925
Cellular Component	GO:1903561	extracellular vesicle	PCMT1	HDA		Human	PMID:24769233
Cellular Component	GO:0043005	neuron projection	Pcmt1	IDA		Rat	PMID:7783974|RGD:10448924
Cellular Component	GO:0043204	perikaryon	Pcmt1	IDA		Rat	PMID:7783974|RGD:10448924
Biological Process	GO:0007568	aging	Pcmt1	IEP		Rat	PMID:7639720|RGD:10448282
Biological Process	GO:0071456	cellular response to hypoxia	Pcmt1	IEP		Rat	PMID:23647599|RGD:10448278
Biological Process	GO:0010667	negative regulation of cardiac muscle cell apoptotic process	Pcmt1	IMP		Rat	PMID:23647599|RGD:10448278
Biological Process	GO:0006479	protein methylation	PCMT1	IDA		Human	PMID:3167043
Biological Process	GO:0006479	protein methylation	Pcmt1	IDA		Mouse	PMID:12023972
Biological Process	GO:0006479	protein methylation	Pcmt1	IDA		Rat	PMID:1886138|RGD:10448957
Biological Process	GO:0050848	regulation of calcium-mediated signaling	pcmt	IGI	ZFIN:ZDB-MRPHLNO-211105-3,ZFIN:ZDB-MRPHLNO-211105-4	Zfish	PMID:33552132
Biological Process	GO:0045471	response to ethanol	Pcmt1	IEP		Rat	PMID:17336420|RGD:10448923
Biological Process	GO:0046498	S-adenosylhomocysteine metabolic process	Pcmt1	IDA		Rat	PMID:8263531|RGD:729481
Biological Process	GO:0046500	S-adenosylmethionine metabolic process	Pcmt1	IDA		Rat	PMID:8263531|RGD:729481

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern