Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Pcyt1a

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes PCYT1A
- Mouse genes Pcyt1a
- Rat genes Pcyt1a
- Zfish genes pcyt1aa,pcyt1ab
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcyt1a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005516	calmodulin binding	Pcyt1a	IDA		Rat	PMID:17804406\|RGD:10448999
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	PCYT1A	IDA		Human	PMID:10480912
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	Pcyt1a	IDA		Mouse	MGI:MGI:2667298\|PMID:12842190
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	Pcyt1a	IDA		Rat	PMID:19783652\|RGD:8553740
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	Pcyt1a	IDA		Rat	PMID:2166941\|RGD:70012
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	Pcyt1a	IDA		Rat	PMID:8185307\|RGD:39458015
Molecular Function	GO:0004105	choline-phosphate cytidylyltransferase activity	Pcyt1a	IDA		Rat	PMID:8381041\|RGD:729578
Molecular Function	GO:0042802	identical protein binding	PCYT1A	IPI	UniProtKB:P49585	Human	PMID:32296183
Molecular Function	GO:0008289	lipid binding	Pcyt1a	IMP		Rat	PMID:2166941\|RGD:70012
Molecular Function	GO:0140678	molecular function inhibitor activity	Pcyt1a	IDA		Rat	PMID:15713672\|RGD:152995549
Molecular Function	GO:0031210	phosphatidylcholine binding	Pcyt1a	IDA		Rat	PMID:9224626\|RGD:10449001
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:O15126	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:O76064	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:O95295	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:P13807	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:P43357	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q70IA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q8N0U8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q9H8S9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q9UBN6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q9Y5K3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCYT1A	IPI	UniProtKB:Q9Y680	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pcyt1a	IPI	PR:Q8BH16	Mouse	PMID:21343341
Molecular Function	GO:0042803	protein homodimerization activity	Pcyt1a	IPI	UniProtKB:P19836	Rat	PMID:19783652\|RGD:8553740
Cellular Component	GO:0005737	cytoplasm	Pcyt1a	IDA		Rat	PMID:11583989\|RGD:70228
Cellular Component	GO:0005783	endoplasmic reticulum	PCYT1A	IDA		Human	PMID:10480912
Cellular Component	GO:0005783	endoplasmic reticulum	Pcyt1a	IDA		Rat	PMID:19684306\|RGD:10449006
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Pcyt1a	IDA		Mouse	PMID:15169678
Cellular Component	GO:0042587	glycogen granule	Pcyt1a	IDA		Mouse	PMID:15169678
Cellular Component	GO:0005635	nuclear envelope	Pcyt1a	IDA		Rat	PMID:11583989\|RGD:70228
Cellular Component	GO:0005634	nucleus	PCYT1A	IDA		Human	PMID:10480912
Cellular Component	GO:0005634	nucleus	Pcyt1a	IDA		Rat	PMID:8185307\|RGD:39458015
Cellular Component	GO:0005886	plasma membrane	Pcyt1a	IDA		Rat	PMID:11583989\|RGD:70228
Biological Process	GO:0006657	CDP-choline pathway	PCYT1A	IDA		Human	PMID:10480912
Biological Process	GO:0006657	CDP-choline pathway	Pcyt1a	IDA		Mouse	MGI:MGI:2667298\|PMID:12842190
Biological Process	GO:0006657	CDP-choline pathway	Pcyt1a	IDA		Rat	PMID:19783652\|RGD:8553740
Biological Process	GO:0006657	CDP-choline pathway	Pcyt1a	IDA		Rat	PMID:8185307\|RGD:39458015
Biological Process	GO:0006657	CDP-choline pathway	Pcyt1a	IDA		Rat	PMID:8381041\|RGD:729578
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	PCYT1A	IDA		Human	PMID:10480912
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IDA		Mouse	MGI:MGI:2667298\|PMID:12842190
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IMP	MGI:MGI:2176050,MGI:MGI:3027956	Mouse	PMID:15798219
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IDA		Mouse	PMID:11829742
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IMP		Rat	PMID:12718547\|RGD:729598
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IDA		Rat	PMID:8185307\|RGD:39458015
Biological Process	GO:0006656	phosphatidylcholine biosynthetic process	Pcyt1a	IDA		Rat	PMID:8381041\|RGD:729578

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/17/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.