Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDCL3
  • Mouse genes Pdcl3
  • Rat genes Pdcl3
  • Zfish genes pdcl3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdcl3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PDCL3	IPI	UniProtKB:P41437	Human	PMID:15371430
Molecular Function	GO:0005515	protein binding	PDCL3	IPI	UniProtKB:P78371	Human	PMID:17429077
Molecular Function	GO:0005515	protein binding	PDCL3	IPI	UniProtKB:P98170	Human	PMID:19012568
Molecular Function	GO:0005515	protein binding	PDCL3	IPI	UniProtKB:P35968	Human	PMID:26059764
Molecular Function	GO:0005515	protein binding	Pdcl3	IPI	UniProtKB:P34058,UniProtKB:P82995	Rat	PMID:27496612|RGD:14695071
Molecular Function	GO:0044183	protein folding chaperone	PDCL3	IPI	UniProtKB:P35968	Human	PMID:23792958
Molecular Function	GO:0044183	protein folding chaperone	PDCL3	IMP		Human	PMID:26059764
Molecular Function	GO:0044183	protein folding chaperone	Pdcl3	IDA		Rat	PMID:27496612|RGD:14695071
Molecular Function	GO:0043184	vascular endothelial growth factor receptor 2 binding	Pdcl3	IPI	PR:P35918	Mouse	PMID:23792958
Cellular Component	GO:0005737	cytoplasm	PDCL3	IDA		Human	PMID:15371430
Cellular Component	GO:0005737	cytoplasm	PDCL3	IDA		Human	PMID:26059764
Cellular Component	GO:0005737	cytoplasm	Pdcl3	IDA		Mouse	MGI:MGI:6316406|PMID:27496612
Cellular Component	GO:0005829	cytosol	PDCL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	PDCL3	IDA		Human	PMID:26059764
Cellular Component	GO:0005654	nucleoplasm	PDCL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0097356	perinucleolar compartment	PDCL3	IDA		Human	PMID:26059764
Cellular Component	GO:0032991	protein-containing complex	Pdcl3	IDA		Mouse	MGI:MGI:6316406|PMID:27496612
Biological Process	GO:0030036	actin cytoskeleton organization	PDCL3	IMP		Human	PMID:17429077
Biological Process	GO:0001525	angiogenesis	PDCL3	IMP		Human	PMID:26059764
Biological Process	GO:0001525	angiogenesis	Pdcl3	IMP		Mouse	MGI:MGI:6316442|PMID:26059764
Biological Process	GO:0001525	angiogenesis	pdcl3	IMP	ZFIN:ZDB-MRPHLNO-160114-1	Zfish	PMID:26059764
Biological Process	GO:0034605	cellular response to heat	Pdcl3	IDA		Rat	PMID:27496612|RGD:14695071
Biological Process	GO:0061077	chaperone-mediated protein folding	PDCL3	IMP		Human	PMID:26059764
Biological Process	GO:1903645	negative regulation of chaperone-mediated protein folding	PDCL3	IMP		Human	PMID:17429077
Biological Process	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	PDCL3	IMP		Human	PMID:23792958
Biological Process	GO:0045766	positive regulation of angiogenesis	PDCL3	IMP		Human	PMID:23792958
Biological Process	GO:0001938	positive regulation of endothelial cell proliferation	PDCL3	IMP		Human	PMID:23792958
Biological Process	GO:0010628	positive regulation of gene expression	PDCL3	IMP		Human	PMID:26059764
Biological Process	GO:0010628	positive regulation of gene expression	Pdcl3	IMP		Mouse	MGI:MGI:6316442|PMID:26059764
Biological Process	GO:0010628	positive regulation of gene expression	pdcl3	IMP		Zfish	PMID:26059764|ZFIN:ZDB-PUB-150611-8
Biological Process	GO:0006457	protein folding	Pdcl3	IDA		Rat	PMID:27496612|RGD:14695071
Biological Process	GO:0050821	protein stabilization	PDCL3	IMP		Human	PMID:26059764
Biological Process	GO:0050730	regulation of peptidyl-tyrosine phosphorylation	PDCL3	IMP		Human	PMID:23792958

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern