Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDLIM7
  • Mouse genes Pdlim7
  • Rat genes Pdlim7
  • Zfish genes pdlim7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdlim7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O00308	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P55040	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9H0I2	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9NRR5	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P09022	Human	PMID:23088713
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P46937	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O95817	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:A4QPB0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O00308	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O43189	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q99816	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O95817	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q99816	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O00308	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O00308	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O43189	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P55040	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O14787-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O43559	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:O95817	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P26196	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P52597	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P55040	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q0VAM2-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q14005-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q3SY00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q494U1-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q7L5A3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q7L8S5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q86YD7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q8ND83	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q8NEC5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q8NEG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q8NFP7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q8NFT8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q99816	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9BUL9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9BWG6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9HBI0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9NWQ4-1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9NYB9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9UBP5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9UBY9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:Q9Y242	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PDLIM7	IPI	UniProtKB:P46937	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Pdlim7	IPI	PR:Q9JID9	Mouse	PMID:15946664
Molecular Function	GO:0005515	protein binding	Pdlim7	IPI	UniProtKB:O35412	Rat	PMID:19900557|RGD:8554803
Cellular Component	GO:0015629	actin cytoskeleton	PDLIM7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015629	actin cytoskeleton	pdlim7	IPI	ZFIN:ZDB-GENE-991124-7	Zfish	PMID:19895804
Cellular Component	GO:0005912	adherens junction	PDLIM7	IDA		Human	PMID:25468996
Cellular Component	GO:0005737	cytoplasm	Pdlim7	IDA		Mouse	PMID:15946664
Cellular Component	GO:0005737	cytoplasm	pdlim7	IDA		Zfish	PMID:19895804
Cellular Component	GO:0031941	filamentous actin	pdlim7	IDA		Zfish	PMID:19895804
Cellular Component	GO:0005925	focal adhesion	PDLIM7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PDLIM7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0048471	perinuclear region of cytoplasm	pdlim7	IDA		Zfish	PMID:19895804
Cellular Component	GO:0001726	ruffle	Pdlim7	IDA		Mouse	PMID:15946664
Cellular Component	GO:0001725	stress fiber	Pdlim7	IDA		Mouse	PMID:15946664
Biological Process	GO:0030036	actin cytoskeleton organization	Pdlim7	IPI	PR:Q9JID9	Mouse	PMID:15946664
Biological Process	GO:0003294	atrial ventricular junction remodeling	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100524-7	Zfish	PMID:19895804
Biological Process	GO:0003294	atrial ventricular junction remodeling	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100521-15	Zfish	PMID:19895804
Biological Process	GO:0003190	atrioventricular valve formation	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100524-7	Zfish	PMID:19895804
Biological Process	GO:0003143	embryonic heart tube morphogenesis	pdlim7	IGI	ZFIN:ZDB-GENO-080813-1,ZFIN:ZDB-MRPHLNO-100524-7	Zfish	PMID:19895804
Biological Process	GO:0001947	heart looping	pdlim7	IGI	ZFIN:ZDB-GENO-100524-1	Zfish	PMID:19895804
Biological Process	GO:0001947	heart looping	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100521-15	Zfish	PMID:19895804
Biological Process	GO:0001947	heart looping	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100524-7	Zfish	PMID:19895804
Biological Process	GO:0033339	pectoral fin development	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-100524-7	Zfish	PMID:20950450
Biological Process	GO:0045669	positive regulation of osteoblast differentiation	Pdlim7	IDA		Rat	PMID:9832452|RGD:632731
Biological Process	GO:0001756	somitogenesis	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-080128-2	Zfish	PMID:17937393
Biological Process	GO:0001756	somitogenesis	pdlim7	IMP	ZFIN:ZDB-MRPHLNO-080128-3	Zfish	PMID:17937393

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern