Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDSS1
  • Mouse genes Pdss1
  • Rat genes Pdss1
  • Zfish genes pdss1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdss1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097269	all-trans-decaprenyl-diphosphate synthase activity	PDSS1	IDA		Human	PMID:16262699
Molecular Function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity	Pdss1	IDA		Mouse	PMID:16262699
Molecular Function	GO:0005515	protein binding	PDSS1	IPI	UniProtKB:Q86YH6	Human	PMID:16262699
Molecular Function	GO:0005515	protein binding	Pdss1	IPI	PR:Q33DR3	Mouse	PMID:16262699
Molecular Function	GO:0046982	protein heterodimerization activity	Pdss1	IDA		Mouse	MGI:MGI:3607849|PMID:16262699
Molecular Function	GO:0000010	trans-hexaprenyltranstransferase activity	PDSS1	IDA		Human	PMID:16262699
Molecular Function	GO:0000010	trans-hexaprenyltranstransferase activity	Pdss1	IDA		Mouse	MGI:MGI:3607849|PMID:16262699
Cellular Component	GO:0005739	mitochondrion	Pdss1	HDA		Mouse	PMID:18614015
Cellular Component	GO:1990234	transferase complex	PDSS1	IDA		Human	PMID:16262699
Cellular Component	GO:1990234	transferase complex	Pdss1	IDA		Mouse	MGI:MGI:3607849|PMID:16262699
Biological Process	GO:0008299	isoprenoid biosynthetic process	PDSS1	IDA		Human	PMID:16262699
Biological Process	GO:0008299	isoprenoid biosynthetic process	Pdss1	IDA		Mouse	MGI:MGI:3607849|PMID:16262699
Biological Process	GO:0006744	ubiquinone biosynthetic process	PDSS1	IDA		Human	PMID:16262699
Biological Process	GO:0006744	ubiquinone biosynthetic process	Pdss1	IDA		Mouse	MGI:MGI:3607849|PMID:16262699

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern