Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PEF1
  • Mouse genes Pef1
  • Rat genes Pef1
  • Zfish genes pef1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pef1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048306	calcium-dependent protein binding	PEF1	IPI	UniProtKB:O75340	Human	PMID:27716508
Molecular Function	GO:0042802	identical protein binding	PEF1	IPI	UniProtKB:Q9UBV8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O75340	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q13137	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q15038	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53G59	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q15038	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O75340	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O14964	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O75340	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q01844	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q13137	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53EZ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53G59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q6PJQ5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q92734	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q6PJQ5	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:A5D8V6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:A6NJ78-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O75340	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O95429	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:O95486-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:P59990	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:P78358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q04637-9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q15038	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q15915	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q3LI76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q4G0P3-6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53EZ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53G59	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q53HV7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q5JUK2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q6PJQ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q71SY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q8IUB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q8IWL8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q92567-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q92734	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q99932-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9H5F2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9NP55	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9NXR5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9NZC7-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9ULX6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PEF1	IPI	UniProtKB:Q9Y5R4	Human	PMID:32296183
Molecular Function	GO:0046983	protein dimerization activity	PEF1	IPI	UniProtKB:O75340	Human	PMID:11883899
Molecular Function	GO:0046982	protein heterodimerization activity	PEF1	IPI	UniProtKB:Q9H553	Human	PMID:11278427
Molecular Function	GO:0003723	RNA binding	PEF1	HDA		Human	PMID:22681889
Molecular Function	GO:1990756	ubiquitin ligase-substrate adaptor activity	PEF1	IMP		Human	PMID:27716508
Cellular Component	GO:0030127	COPII vesicle coat	PEF1	IDA		Human	PMID:27716508
Cellular Component	GO:0031463	Cul3-RING ubiquitin ligase complex	PEF1	IDA		Human	PMID:27716508
Cellular Component	GO:0005737	cytoplasm	PEF1	IDA		Human	PMID:11278427
Cellular Component	GO:0070062	extracellular exosome	PEF1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	PEF1	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	PEF1	HDA		Human	PMID:23533145
Biological Process	GO:0048208	COPII vesicle coating	PEF1	IMP		Human	PMID:27716508
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	PEF1	IMP		Human	PMID:27716508
Biological Process	GO:0014032	neural crest cell development	PEF1	IMP		Human	PMID:27716508
Biological Process	GO:0014029	neural crest formation	PEF1	IMP		Human	PMID:27716508
Biological Process	GO:1902527	positive regulation of protein monoubiquitination	PEF1	IMP		Human	PMID:27716508
Biological Process	GO:0051592	response to calcium ion	PEF1	IPI	UniProtKB:Q9H553	Human	PMID:11278427

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern