Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PGAP1
  • Mouse genes Pgap1
  • Rat genes Pgap1
  • Zfish genes pgap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pgap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050185	phosphatidylinositol deacylase activity	Pgap1	IMP		Rat	PMID:14734546|RGD:1303970
Cellular Component	GO:0005783	endoplasmic reticulum	Pgap1	IDA		Rat	PMID:14734546|RGD:1303970
Biological Process	GO:0009948	anterior/posterior axis specification	Pgap1	IMP	MGI:MGI:1856621	Mouse	PMID:10529425
Biological Process	GO:0009948	anterior/posterior axis specification	Pgap1	IGI	MGI:MGI:99783	Mouse	PMID:10529425
Biological Process	GO:0009880	embryonic pattern specification	Pgap1	IMP	MGI:MGI:1856621	Mouse	PMID:10529425
Biological Process	GO:0009880	embryonic pattern specification	Pgap1	IGI	MGI:MGI:99783	Mouse	PMID:10529425
Biological Process	GO:0021871	forebrain regionalization	Pgap1	IGI	MGI:MGI:99783	Mouse	PMID:10529425
Biological Process	GO:0021871	forebrain regionalization	Pgap1	IMP	MGI:MGI:1856621	Mouse	PMID:10529425
Biological Process	GO:0006506	GPI anchor biosynthetic process	Pgap1	IMP		Rat	PMID:14734546|RGD:1303970
Biological Process	GO:0060322	head development	Pgap1	IMP	MGI:MGI:1856621	Mouse	PMID:10529425
Biological Process	GO:0060322	head development	Pgap1	IGI	MGI:MGI:99783	Mouse	PMID:10529425
Biological Process	GO:0060322	head development	Pgap1	IMP	MGI:MGI:1856621	Mouse	PMID:4019727
Biological Process	GO:1902953	positive regulation of ER to Golgi vesicle-mediated transport	Pgap1	IMP		Rat	PMID:14734546|RGD:1303970
Biological Process	GO:0007605	sensory perception of sound	Pgap1	IMP	MGI:MGI:3708344	Mouse	PMID:17329413

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern