Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHC1
  • Mouse genes Phc1
  • Rat genes Phc1
  • Zfish genes phc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Phc1	IDA		Mouse	PMID:16687444
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35226	Human	PMID:19636380
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:19636380
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35226	Human	PMID:20601937
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:20601937
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35226	Human	PMID:23523425
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:23523425
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35226	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35226	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:Q5VUG0	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P35227	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:P78317	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:Q3KNV8-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:Q5VUG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:Q8IZU1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHC1	IPI	UniProtKB:Q9H190	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:3807116|PMID:18650381
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:5431036|PMID:22325148
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:P49138	Mouse	MGI:MGI:3846485|PMID:19369945
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:3715707|PMID:17296600
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q9QWH1	Mouse	MGI:MGI:3586402|PMID:16024804
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:2389282|PMID:12183370
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:P23798	Mouse	MGI:MGI:5431036|PMID:22325148
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:Q8K214	Mouse	MGI:MGI:1351527|PMID:10653359
Molecular Function	GO:0005515	protein binding	Phc1	IPI	UniProtKB:P23798	Mouse	MGI:MGI:2389282|PMID:12183370
Cellular Component	GO:0016604	nuclear body	Phc1	IDA		Mouse	PMID:12183370
Cellular Component	GO:0005654	nucleoplasm	PHC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PHC1	IDA		Human	PMID:21282530
Cellular Component	GO:0005634	nucleus	Phc1	IDA		Mouse	PMID:14557078
Cellular Component	GO:0031519	PcG protein complex	PHC1	IDA		Human	PMID:21282530
Cellular Component	GO:0035102	PRC1 complex	PHC1	IDA		Human	PMID:12167701
Cellular Component	GO:0035102	PRC1 complex	PHC1	IDA		Human	PMID:19636380
Cellular Component	GO:0001739	sex chromatin	Phc1	IDA		Mouse	PMID:15525528
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Phc1	IEP		Mouse	PMID:20439489
Biological Process	GO:0071300	cellular response to retinoic acid	Phc1	IDA		Mouse	PMID:8070621
Biological Process	GO:0016574	histone ubiquitination	PHC1	IDA		Human	PMID:23418308

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern