Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Phf1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes PHF1
- Mouse genes Phf1
- Rat genes Phf1
- Zfish genes phf1
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Phf1	IDA		Rat	PMID:23879974\|RGD:9586746
Molecular Function	GO:1990226	histone methyltransferase binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:29628311
Molecular Function	GO:0042802	identical protein binding	PHF1	IPI	UniProtKB:O43189	Human	PMID:29628311
Molecular Function	GO:0035064	methylated histone binding	PHF1	IDA		Human	PMID:23142980
Molecular Function	GO:0035064	methylated histone binding	PHF1	IDA		Human	PMID:23273982
Molecular Function	GO:0035064	methylated histone binding	Phf1	IDA		Mouse	MGI:MGI:5487476\|PMID:23104054
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:11571280
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q93062	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NVV9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q12800	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:23142980
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P36406	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q08AM6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q12800	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q13137	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15742	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q93062	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q96CA5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9BPX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NR12	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9ULK2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:O75530	Human	PMID:29628311
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P04637	Human	PMID:29628311
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15022	Human	PMID:29628311
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P36406	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15742	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q96CA5	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9BPX1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NR12	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:A6NEM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:O14503	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:O60304	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:O60504	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P0C7X2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P52954	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P53539	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:P86480	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q03989	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q05516	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q05BL1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q14192	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15742	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q4G0R1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q5JST6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q5T686	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q5VVH5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q63HR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q6A162	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q6PF18	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q6PI77	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q6ZU52	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q70EL1-9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q8N9W6-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q8NC74	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q8TF50	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q92782-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q92917	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q93062-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q96B67	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q96DT7-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q96NM4-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q99471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q99932-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9BPX1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9BRK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9H0W8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9H6J7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9HBE1-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NQZ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NRI5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NVV9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NYB9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9NZV7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9UGI0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q9Y5V3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF1	IPI	UniProtKB:Q15910	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	Phf1	IPI	UniProtKB:Q921W0	Mouse	MGI:MGI:3688059\|PMID:11559747
Molecular Function	GO:0005515	protein binding	Phf1	IPI	RGD:1593621	Rat	PMID:23879974\|RGD:9586746
Molecular Function	GO:0001222	transcription corepressor binding	PHF1	IPI	UniProtKB:Q96JN0	Human	PMID:29628311
Cellular Component	GO:0005813	centrosome	PHF1	IDA		Human	PMID:20873783
Cellular Component	GO:0005829	cytosol	PHF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0035098	ESC/E(Z) complex	Phf1	IDA		Mouse	PMID:31451685
Cellular Component	GO:0005654	nucleoplasm	PHF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PHF1	IDA		Human	PMID:23273982
Cellular Component	GO:0005634	nucleus	Phf1	IDA		Rat	PMID:23879974\|RGD:9586746
Cellular Component	GO:0035861	site of double-strand break	PHF1	IDA		Human	PMID:23142980
Biological Process	GO:0006974	DNA damage response	PHF1	IDA		Human	PMID:23142980
Biological Process	GO:0061086	negative regulation of histone H3-K27 methylation	PHF1	IMP		Human	PMID:23142980
Biological Process	GO:0061087	positive regulation of histone H3-K27 methylation	PHF1	IMP		Human	PMID:23273982

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.