Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHF6
  • Mouse genes Phf6
  • Rat genes Phf6
  • Zfish genes phf6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phf6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	PHF6	IPI	UniProtKB:O75643	Human	PMID:22720776
Molecular Function	GO:0042393	histone binding	PHF6	IPI	UniProtKB:P0C0S5	Human	PMID:22720776
Molecular Function	GO:0042393	histone binding	PHF6	IPI	UniProtKB:P16403	Human	PMID:22720776
Molecular Function	GO:0042393	histone binding	PHF6	IPI	UniProtKB:P33778	Human	PMID:22720776
Molecular Function	GO:0042393	histone binding	PHF6	IPI	UniProtKB:P68431	Human	PMID:22720776
Molecular Function	GO:0042826	histone deacetylase binding	PHF6	IPI	UniProtKB:Q13547	Human	PMID:22720776
Molecular Function	GO:0051219	phosphoprotein binding	PHF6	IPI	UniProtKB:P06748	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P05388	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P12273	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P22087	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P35268	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P36578	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P37108	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P61326	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P62269	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P62851	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:P62888	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q09028	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q12873	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q14839	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q16576	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q9NX58	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	PHF6	IPI	UniProtKB:Q9UKM9	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:P07910	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:P22626	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:P31942	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:P51991	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:Q00839	Human	PMID:22720776
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PHF6	IPI	UniProtKB:Q15366	Human	PMID:22720776
Molecular Function	GO:0003723	RNA binding	PHF6	HDA		Human	PMID:22658674
Molecular Function	GO:0097110	scaffold protein binding	PHF6	IPI	UniProtKB:Q6P2Q9	Human	PMID:22720776
Molecular Function	GO:0015631	tubulin binding	PHF6	IPI	UniProtKB:Q9BQE3	Human	PMID:22720776
Cellular Component	GO:0005730	nucleolus	PHF6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	PHF6	IDA		Human	PMID:22720776
Cellular Component	GO:0005654	nucleoplasm	PHF6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PHF6	IDA		Human	PMID:22720776
Cellular Component	GO:0005634	nucleus	Phf6	IDA		Mouse	PMID:17698420
Biological Process	GO:0001835	blastocyst hatching	Phf6	IMP		Mouse	PMID:27869233
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	PHF6	IDA		Human	PMID:24554700
Biological Process	GO:0033081	regulation of T cell differentiation in thymus	phf6	IMP	ZFIN:ZDB-GENO-220721-24	Zfish	PMID:33251223

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern