Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHLDA1
  • Mouse genes Phlda1
  • Rat genes Phlda1
  • Zfish genes phlda1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phlda1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PHLDA1	IPI	UniProtKB:O15371	Human	PMID:11369516
Molecular Function	GO:0005515	protein binding	PHLDA1	IPI	UniProtKB:P50914	Human	PMID:11369516
Molecular Function	GO:0005515	protein binding	PHLDA1	IPI	UniProtKB:Q13310	Human	PMID:11369516
Molecular Function	GO:0005515	protein binding	PHLDA1	IPI	UniProtKB:Q99750	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PHLDA1	IPI	UniProtKB:Q99750	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	Phlda1	IPI	UniProtKB:P25685|UniProtKB:Q92598	Mouse	MGI:MGI:3703130|PMID:17024176
Cellular Component	GO:0005730	nucleolus	PHLDA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PHLDA1	IDA		Human	GO_REF:0000052
Biological Process	GO:0045210	FasL biosynthetic process	Phlda1	IDA		Mouse	PMID:8673705
Biological Process	GO:0021879	forebrain neuron differentiation	Phlda1	IEP		Rat	PMID:10428057|RGD:70034
Biological Process	GO:0043065	positive regulation of apoptotic process	Phlda1	IDA		Rat	PMID:10428057|RGD:70034

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern