Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PJVK
  • Mouse genes Pjvk
  • Rat genes Pjvk
  • Zfish genes pjvk
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pjvk

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Pjvk	IPI	PR:Q9JKF1	Mouse	PMID:28089576
Molecular Function	GO:0005515	protein binding	Pjvk	IPI	UniProtKB:P46940	Mouse	PMID:28089576
Molecular Function	GO:0005515	protein binding	Pjvk	IPI	PR:P70336	Mouse	PMID:28089576
Molecular Function	GO:0005515	protein binding	Pjvk	IPI	UniProtKB:Q62868	Mouse	PMID:28089576
Molecular Function	GO:0005515	protein binding	Pjvk	IPI	PR:Q99KW3	Mouse	PMID:28209736
Cellular Component	GO:0035253	ciliary rootlet	Pjvk	IDA		Mouse	PMID:28209736
Cellular Component	GO:0030864	cortical actin cytoskeleton	Pjvk	IDA		Mouse	PMID:28089576
Cellular Component	GO:0005737	cytoplasm	Pjvk	IDA		Mouse	PMID:28209736
Cellular Component	GO:0043025	neuronal cell body	Pjvk	IDA		Mouse	PMID:16804542
Cellular Component	GO:0005778	peroxisomal membrane	Pjvk	IDA		Mouse	MGI:MGI:5704282|PMID:26544938
Cellular Component	GO:0120044	stereocilium base	Pjvk	IDA		Mouse	PMID:28209736
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	Pjvk	IMP	MGI:MGI:3686985,MGI:MGI:5925280	Mouse	PMID:28089576
Biological Process	GO:0000425	pexophagy	Pjvk	IMP		Mouse	MGI:MGI:6294584|PMID:30936319
Biological Process	GO:0097468	programmed cell death in response to reactive oxygen species	Pjvk	IMP		Mouse	MGI:MGI:6294584|PMID:30936319
Biological Process	GO:1900063	regulation of peroxisome organization	Pjvk	IMP		Mouse	MGI:MGI:6294584|PMID:30936319
Biological Process	GO:1900063	regulation of peroxisome organization	Pjvk	IMP		Mouse	MGI:MGI:5704282|PMID:26544938
Biological Process	GO:0000302	response to reactive oxygen species	Pjvk	IMP		Mouse	MGI:MGI:6294584|PMID:30936319
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP		Mouse	MGI:MGI:5704282|PMID:26544938
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP		Mouse	MGI:MGI:6294584|PMID:30936319
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP	MGI:MGI:3708376	Mouse	PMID:17329413
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP	MGI:MGI:5316514,MGI:MGI:5925280	Mouse	PMID:28089576
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP	MGI:MGI:3686985,MGI:MGI:5925280	Mouse	PMID:28089576
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP	MGI:MGI:5014098,MGI:MGI:5925280	Mouse	PMID:28209736
Biological Process	GO:0007605	sensory perception of sound	Pjvk	IMP	MGI:MGI:3654320	Mouse	PMID:16804542
Biological Process	GO:0120045	stereocilium maintenance	Pjvk	IMP	MGI:MGI:5014098,MGI:MGI:5925280	Mouse	PMID:28209736

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern