Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PKD1L1
  • Mouse genes Pkd1l1
  • Rat genes Pkd1l1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pkd1l1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005262	calcium channel activity	PKD1L1	IDA		Human	PMID:24336289
Molecular Function	GO:0005515	protein binding	PKD1L1	IPI	UniProtKB:Q9P0L9	Human	PMID:24336289
Molecular Function	GO:0005515	protein binding	Pkd1l1	IPI	UniProtKB:O35245	Mouse	MGI:MGI:4946570|PMID:21307093
Cellular Component	GO:0034704	calcium channel complex	PKD1L1	IDA		Human	PMID:24336289
Cellular Component	GO:0005929	cilium	Pkd1l1	IMP		Mouse	MGI:MGI:4946570|PMID:21307093
Cellular Component	GO:0097730	non-motile cilium	PKD1L1	IDA		Human	PMID:24336289
Biological Process	GO:0003127	detection of nodal flow	Pkd1l1	IMP		Mouse	MGI:MGI:4946570|PMID:21307093
Biological Process	GO:0007368	determination of left/right symmetry	Pkd1l1	IMP		Mouse	PMID:25807483
Biological Process	GO:0007507	heart development	Pkd1l1	IMP		Mouse	PMID:25807483
Biological Process	GO:0070986	left/right axis specification	Pkd1l1	IMP		Mouse	MGI:MGI:4946570|PMID:21307093
Biological Process	GO:0060972	left/right pattern formation	Pkd1l1	IMP	MGI:MGI:4949891	Mouse	PMID:20080492

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern