Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PKD1L3
  • Mouse genes Pkd1l3
  • Rat genes Pkd1l3
  • Zfish genes pkd1l3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pkd1l3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005261	monoatomic cation channel activity	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Molecular Function	GO:0008324	monoatomic cation transmembrane transporter activity	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Molecular Function	GO:0005515	protein binding	PKD1L3	IPI	UniProtKB:Q9P0L9	Human	PMID:20538909
Molecular Function	GO:0005515	protein binding	Pkd1l3	IPI	UniProtKB:A2A259	Mouse	MGI:MGI:5315344|PMID:16891422
Molecular Function	GO:0033040	sour taste receptor activity	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Cellular Component	GO:0034703	cation channel complex	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Cellular Component	GO:0009986	cell surface	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Cellular Component	GO:0070062	extracellular exosome	PKD1L3	HDA		Human	PMID:19056867
Cellular Component	GO:0005886	plasma membrane	PKD1L3	IDA		Human	PMID:20538909
Cellular Component	GO:0043235	receptor complex	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Biological Process	GO:0071468	cellular response to acidic pH	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Biological Process	GO:0001581	detection of chemical stimulus involved in sensory perception of sour taste	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Biological Process	GO:0006812	monoatomic cation transport	Pkd1l3	IDA		Mouse	MGI:MGI:5315344|PMID:16891422
Biological Process	GO:0050915	sensory perception of sour taste	PKD1L3	IMP		Human	PMID:19812697

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern