Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PKP4
  • Mouse genes Pkp4
  • Rat genes Pkp4
  • Zfish genes pkp4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pkp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q96RT1	Human	PMID:12047349
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q96RT1-2	Human	PMID:12047349
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q96RT1	Human	PMID:16203728
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q96RT1-2	Human	PMID:16203728
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:P61586	Human	PMID:17115030
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q9H8V3	Human	PMID:17115030
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q68DX3	Human	PMID:19706687
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q8NFG4	Human	PMID:22965878
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q12959	Human	PMID:24550280
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q14160	Human	PMID:24550280
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q96RT1	Human	PMID:24550280
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q15834	Human	PMID:25009281
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:P36406	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q8N5M1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q12959	Human	PMID:30126976
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q14160	Human	PMID:30126976
Molecular Function	GO:0005515	protein binding	PKP4	IPI	UniProtKB:Q8N5M1	Human	PMID:31515488
Cellular Component	GO:0030054	cell junction	PKP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0044291	cell-cell contact zone	PKP4	IDA		Human	PMID:22965878
Cellular Component	GO:0005911	cell-cell junction	PKP4	IDA		Human	PMID:8937994
Cellular Component	GO:0005737	cytoplasm	PKP4	IDA		Human	PMID:22965878
Cellular Component	GO:0009898	cytoplasmic side of plasma membrane	PKP4	IDA		Human	PMID:17115030
Cellular Component	GO:0005856	cytoskeleton	PKP4	IDA		Human	PMID:8937994
Cellular Component	GO:0030057	desmosome	PKP4	IDA		Human	PMID:8937994
Cellular Component	GO:0030496	midbody	PKP4	IDA		Human	PMID:22965878
Cellular Component	GO:0030496	midbody	PKP4	IDA		Human	PMID:17115030
Cellular Component	GO:0072686	mitotic spindle	PKP4	IDA		Human	PMID:17115030
Cellular Component	GO:0048471	perinuclear region of cytoplasm	PKP4	IDA		Human	PMID:8937994
Cellular Component	GO:0005886	plasma membrane	PKP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	PKP4	IDA		Human	PMID:8937994
Cellular Component	GO:0014069	postsynaptic density	Pkp4	IDA		Mouse	PMID:17114649
Cellular Component	GO:0051233	spindle midzone	PKP4	IDA		Human	PMID:17115030
Cellular Component	GO:0000922	spindle pole	PKP4	IDA		Human	PMID:17115030
Biological Process	GO:0007043	cell-cell junction assembly	Pkp4	IMP		Mouse	MGI:MGI:5487492|PMID:22965878
Biological Process	GO:0032467	positive regulation of cytokinesis	PKP4	IMP		Human	PMID:17115030
Biological Process	GO:0043547	positive regulation of GTPase activity	PKP4	IDA		Human	PMID:17115030

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern