Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PMS1
  • Mouse genes Pms1
  • Rat genes Pms1
  • Zfish genes pms1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pms1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	PMS1	IPI	UniProtKB:Q9NXL9	Human	PMID:26300262
Molecular Function	GO:0005515	protein binding	PMS1	IPI	UniProtKB:P40692	Human	PMID:11292842
Molecular Function	GO:0005515	protein binding	PMS1	IPI	UniProtKB:P40692	Human	PMID:25502805
Molecular Function	GO:0005515	protein binding	PMS1	IPI	UniProtKB:P40692	Human	PMID:34591612
Cellular Component	GO:0005634	nucleus	PMS1	IDA		Human	PMID:26300262
Biological Process	GO:0006298	mismatch repair	Pms1	IMP	MGI:MGI:1857948	Mouse	PMID:9500552
Biological Process	GO:0009410	response to xenobiotic stimulus	Pms1	IEP		Rat	PMID:11754170|RGD:2302854

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern