Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PNPO
  • Mouse genes Pnpo
  • Rat genes Pnpo
  • Zfish genes pnpo
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pnpo

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0010181	FMN binding	PNPO	IDA		Human	PMID:12824491
Molecular Function	GO:0005515	protein binding	PNPO	IPI	UniProtKB:Q6RW13-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PNPO	IPI	UniProtKB:Q96DZ9-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PNPO	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PNPO	IPI	UniProtKB:Q9H400	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	PNPO	IDA		Human	PMID:12824491
Molecular Function	GO:0030170	pyridoxal phosphate binding	PNPO	IDA		Human	PMID:12824491
Molecular Function	GO:0004733	pyridoxamine-phosphate oxidase activity	PNPO	IDA		Human	PMID:12824491
Molecular Function	GO:0004733	pyridoxamine-phosphate oxidase activity	PNPO	IDA		Human	PMID:15772097
Molecular Function	GO:0004733	pyridoxamine-phosphate oxidase activity	Pnpo	IDA		Rat	PMID:9601034|RGD:634494
Molecular Function	GO:0004733	pyridoxamine-phosphate oxidase activity	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955
Biological Process	GO:0009448	gamma-aminobutyric acid metabolic process	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955
Biological Process	GO:0006536	glutamate metabolic process	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955
Biological Process	GO:0006544	glycine metabolic process	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955
Biological Process	GO:0042821	pyridoxal biosynthetic process	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955
Biological Process	GO:0042823	pyridoxal phosphate biosynthetic process	PNPO	IDA		Human	PMID:12824491
Biological Process	GO:0036269	swimming behavior	pnpo	IMP	ZFIN:ZDB-GENO-221021-2	Zfish	PMID:31759955

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern