Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POLDIP3
  • Mouse genes Poldip3
  • Rat genes Poldip3
  • Zfish genes poldip3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Poldip3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	POLDIP3	IPI	UniProtKB:P38919	Human	PMID:18423201
Molecular Function	GO:0005515	protein binding	POLDIP3	IPI	UniProtKB:Q09161	Human	PMID:18423201
Molecular Function	GO:0005515	protein binding	POLDIP3	IPI	UniProtKB:Q8NI27	Human	PMID:22928037
Molecular Function	GO:0044877	protein-containing complex binding	POLDIP3	IPI	ComplexPortal:CPX-1941	Human	PMID:18423201
Molecular Function	GO:0044877	protein-containing complex binding	POLDIP3	IPI	GO:0000346	Human	PMID:20844015
Molecular Function	GO:0044877	protein-containing complex binding	POLDIP3	IPI	GO:0000346	Human	PMID:22928037
Molecular Function	GO:0003723	RNA binding	POLDIP3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	POLDIP3	HDA		Human	PMID:22681889
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	POLDIP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	POLDIP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	POLDIP3	IDA		Human	PMID:18423201
Biological Process	GO:0016973	poly(A)+ mRNA export from nucleus	POLDIP3	IDA		Human	PMID:22928037
Biological Process	GO:0016973	poly(A)+ mRNA export from nucleus	Poldip3	IDA		Mouse	MGI:MGI:5520029|PMID:22928037
Biological Process	GO:0045727	positive regulation of translation	POLDIP3	IMP		Human	PMID:18423201

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern