Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POMGNT1
  • Mouse genes Pomgnt1
  • Rat genes Pomgnt1
  • Zfish genes pomgnt1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pomgnt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008375	acetylglucosaminyltransferase activity	POMGNT1	IMP		Human	PMID:26908613
Molecular Function	GO:0008375	acetylglucosaminyltransferase activity	POMGNT1	IMP		Human	PMID:27391550
Molecular Function	GO:0008375	acetylglucosaminyltransferase activity	POMGNT1	IDA		Human	PMID:27493216
Molecular Function	GO:0047223	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity	POMGNT1	IDA		Human	PMID:11742540
Molecular Function	GO:0030145	manganese ion binding	POMGNT1	IDA		Human	PMID:27493216
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:O75072	Human	PMID:17034757
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q9Y2B1	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q8TBB1	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:P04233-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q5JRM2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q8N5K1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q96Q45-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q9Y2B1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	POMGNT1	IPI	UniProtKB:Q9H5K3	Human	PMID:32707033
Cellular Component	GO:0000139	Golgi membrane	POMGNT1	IDA		Human	PMID:17034757
Cellular Component	GO:0016020	membrane	POMGNT1	IMP		Human	PMID:27493216
Biological Process	GO:0071711	basement membrane organization	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:21970971
Biological Process	GO:0021542	dentate gyrus development	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:21970971
Biological Process	GO:0010467	gene expression	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:21129441
Biological Process	GO:0010467	gene expression	Pomgnt1	IMP	MGI:MGI:3832592	Mouse	PMID:22270369
Biological Process	GO:0016266	O-glycan processing	POMGNT1	IDA		Human	PMID:27493216
Biological Process	GO:0006486	protein glycosylation	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:22728091
Biological Process	GO:0036211	protein modification process	Pomgnt1	IMP	MGI:MGI:3832592	Mouse	PMID:22270369
Biological Process	GO:0006493	protein O-linked glycosylation	POMGNT1	IDA		Human	PMID:11709191
Biological Process	GO:0006493	protein O-linked glycosylation	POMGNT1	IMP		Human	PMID:26908613
Biological Process	GO:0006493	protein O-linked glycosylation	POMGNT1	IMP		Human	PMID:27391550
Biological Process	GO:0006493	protein O-linked glycosylation	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:16458488
Biological Process	GO:0035269	protein O-linked mannosylation	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:21460210
Biological Process	GO:0150103	reactive gliosis	Pomgnt1	IMP	MGI:MGI:3623521	Mouse	PMID:21970971

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern