Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POMP
  • Mouse genes Pomp
  • Rat genes Pomp
  • Zfish genes pomp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pomp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P20618	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P28065	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P28074	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:Q99436	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P20618	Human	PMID:17948026
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P28074	Human	PMID:17948026
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P49720	Human	PMID:17948026
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:Q99436	Human	PMID:17948026
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P49720	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P20618	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P28065	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P49720	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:Q99436	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:P28065	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	POMP	IPI	UniProtKB:Q15777	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pomp	IPI	MGI:MGI:2145557	Mouse	PMID:23429752
Cellular Component	GO:0005737	cytoplasm	Pomp	IDA		Mouse	PMID:23429752
Cellular Component	GO:0016607	nuclear speck	POMP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Pomp	IDA		Mouse	PMID:23429752
Biological Process	GO:0043248	proteasome assembly	POMP	IMP		Human	PMID:17948026

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern