Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POP1
  • Mouse genes Pop1
  • Rat genes Pop1
  • Zfish genes pop1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pop1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	POP1	IPI	UniProtKB:O95707	Human	PMID:15096576
Molecular Function	GO:0005515	protein binding	POP1	IPI	UniProtKB:Q9BUL9	Human	PMID:15096576
Molecular Function	GO:0005515	protein binding	POP1	IPI	UniProtKB:O95707	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POP1	IPI	UniProtKB:Q9BUL9	Human	PMID:28514442
Molecular Function	GO:0004526	ribonuclease P activity	POP1	IDA		Human	PMID:30454648
Molecular Function	GO:0004526	ribonuclease P activity	POP1	IDA		Human	PMID:8918471
Molecular Function	GO:0033204	ribonuclease P RNA binding	POP1	IDA		Human	PMID:16723659
Molecular Function	GO:0033204	ribonuclease P RNA binding	POP1	IDA		Human	PMID:30454648
Molecular Function	GO:0003723	RNA binding	POP1	HDA		Human	PMID:22658674
Cellular Component	GO:0005615	extracellular space	POP1	HDA		Human	PMID:22664934
Cellular Component	GO:0030681	multimeric ribonuclease P complex	POP1	IDA		Human	PMID:16723659
Cellular Component	GO:0030681	multimeric ribonuclease P complex	POP1	IDA		Human	PMID:30454648
Cellular Component	GO:0005655	nucleolar ribonuclease P complex	POP1	IDA		Human	PMID:8918471
Cellular Component	GO:0005730	nucleolus	POP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000172	ribonuclease MRP complex	POP1	IDA		Human	PMID:16723659
Cellular Component	GO:0000172	ribonuclease MRP complex	POP1	IDA		Human	PMID:8918471
Biological Process	GO:0001682	tRNA 5'-leader removal	POP1	IDA		Human	PMID:16723659
Biological Process	GO:0001682	tRNA 5'-leader removal	POP1	IDA		Human	PMID:30454648
Biological Process	GO:0016078	tRNA catabolic process	POP1	IDA		Human	PMID:8918471

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern