Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PPBP
  • Mouse genes Ppbp
  • Rat genes Ppbp
  • Zfish genes cxcl8a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ppbp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008009	chemokine activity	Ppbp	IDA		Mouse	PMID:23550035
Molecular Function	GO:0008009	chemokine activity	cxcl8a	IDA		Zfish	PMID:27815178
Molecular Function	GO:0005515	protein binding	PPBP	IPI	UniProtKB:P13501	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	PPBP	IPI	UniProtKB:Q07325	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	PPBP	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPBP	IPI	UniProtKB:P06307	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPBP	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Biological Process	GO:0001525	angiogenesis	cxcl8a	IDA		Zfish	PMID:28949016
Biological Process	GO:0071219	cellular response to molecule of bacterial origin	cxcl8a	IDA		Zfish	PMID:31900206
Biological Process	GO:0071305	cellular response to vitamin D	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-5	Zfish	PMID:27705794
Biological Process	GO:0071305	cellular response to vitamin D	cxcl8a	IMP	ZFIN:ZDB-GENO-151016-4	Zfish	PMID:27705794
Biological Process	GO:0098508	endothelial to hematopoietic transition	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-5	Zfish	PMID:25870200
Biological Process	GO:0071621	granulocyte chemotaxis	cxcl8a	IDA		Zfish	PMID:27815178
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-5	Zfish	PMID:25870200
Biological Process	GO:0060218	hematopoietic stem cell differentiation	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-5	Zfish	PMID:25870200
Biological Process	GO:0002523	leukocyte migration involved in inflammatory response	Ppbp	IMP	MGI:MGI:3797508	Mouse	PMID:23550035
Biological Process	GO:0002523	leukocyte migration involved in inflammatory response	cxcl8a	IMP	ZFIN:ZDB-GENO-151016-4	Zfish	PMID:28538177
Biological Process	GO:0002523	leukocyte migration involved in inflammatory response	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-140630-1	Zfish	PMID:23509368
Biological Process	GO:0030593	neutrophil chemotaxis	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-140630-1	Zfish	PMID:25445910
Biological Process	GO:0030593	neutrophil chemotaxis	cxcl8a	IDA		Zfish	PMID:23219724
Biological Process	GO:0030593	neutrophil chemotaxis	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-130219-5	Zfish	PMID:27806130
Biological Process	GO:0030593	neutrophil chemotaxis	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-130219-5	Zfish	PMID:23219724
Biological Process	GO:1990266	neutrophil migration	cxcl8a	IMP	ZFIN:ZDB-GENO-151016-4	Zfish	PMID:28538177
Biological Process	GO:1990266	neutrophil migration	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-140630-1	Zfish	PMID:28642884
Biological Process	GO:0002631	regulation of granuloma formation	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-130219-5	Zfish	PMID:27806130
Biological Process	GO:0002631	regulation of granuloma formation	cxcl8a	IGI	ZFIN:ZDB-GENE-040426-2252	Zfish	PMID:27806130
Biological Process	GO:0009617	response to bacterium	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-140630-1	Zfish	PMID:25445910
Biological Process	GO:0009617	response to bacterium	cxcl8a	IGI	ZFIN:ZDB-GENE-040426-2252	Zfish	PMID:27806130
Biological Process	GO:0009617	response to bacterium	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-130219-5	Zfish	PMID:27806130
Biological Process	GO:1901698	response to nitrogen compound	cxcl8a	IDA		Zfish	PMID:31900206
Biological Process	GO:0014070	response to organic cyclic compound	cxcl8a	IDA		Zfish	PMID:31900206
Biological Process	GO:0009611	response to wounding	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-140630-1	Zfish	PMID:23509368
Biological Process	GO:0001570	vasculogenesis	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-6	Zfish	PMID:21493894
Biological Process	GO:0001570	vasculogenesis	cxcl8a	IMP	ZFIN:ZDB-MRPHLNO-120222-5	Zfish	PMID:21493894

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern