Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PPIB
  • Mouse genes Ppib
  • Rat genes Ppib
  • Zfish genes ppib
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ppib

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016018	cyclosporin A binding	PPIB	IDA		Human	PMID:20676357
Molecular Function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	PPIB	IDA		Human	PMID:20676357
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9Y613	Human	PMID:15095401
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9WMX2:PRO_0000037552	Human	PMID:15989969
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9WMB5	Human	PMID:20147391
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q7RTS9	Human	PMID:21280149
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q96EQ0	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P13667	Human	PMID:22665516
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P40855	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q8N9N5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P13667	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:A0A087WZY1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:O43765	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P17066	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P40855	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q13061-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:O43292-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:P09017	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q02363	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q06547-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q13586	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q7Z7K6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q8N5Z5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9H2C1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9NWQ4-1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9NWS8-3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9NZC7-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PPIB	IPI	UniProtKB:Q9Y4X4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Ppib	IPI	UniProtKB:Q8K2B0	Mouse	MGI:MGI:5779580|PMID:27119146
Molecular Function	GO:0005515	protein binding	Ppib	IPI	UniProtKB:P38659	Rat	PMID:22665516|RGD:8553430
Molecular Function	GO:0003723	RNA binding	PPIB	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PPIB	HDA		Human	PMID:22681889
Molecular Function	GO:0070063	RNA polymerase binding	PPIB	IPI	UniProtKB:Q9WMX2:PRO_0000037552	Human	PMID:15989969
Cellular Component	GO:0005783	endoplasmic reticulum	PPIB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	PPIB	IDA		Human	PMID:20089953
Cellular Component	GO:0034663	endoplasmic reticulum chaperone complex	Ppib	IDA		Mouse	MGI:MGI:5613481|PMID:12475965
Cellular Component	GO:0070062	extracellular exosome	PPIB	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	PPIB	HDA		Human	PMID:19199708
Cellular Component	GO:0070062	extracellular exosome	PPIB	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	PPIB	HDA		Human	PMID:23533145
Cellular Component	GO:0005925	focal adhesion	PPIB	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	PPIB	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	PPIB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PPIB	HDA		Human	PMID:21630459
Cellular Component	GO:0048471	perinuclear region of cytoplasm	PPIB	IDA		Human	PMID:15989969
Cellular Component	GO:0005790	smooth endoplasmic reticulum	Ppib	IDA		Rat	PMID:22665516|RGD:8553430
Biological Process	GO:0060348	bone development	PPIB	IMP		Human	PMID:20089953
Biological Process	GO:0061077	chaperone-mediated protein folding	PPIB	IDA		Human	PMID:22665516
Biological Process	GO:0030593	neutrophil chemotaxis	PPIB	IDA		Human	PMID:11688976
Biological Process	GO:0044829	positive regulation by host of viral genome replication	PPIB	IMP		Human	PMID:15989969
Biological Process	GO:0044794	positive regulation by host of viral process	PPIB	IMP		Human	PMID:15989969
Biological Process	GO:0040018	positive regulation of multicellular organism growth	PPIB	IMP		Human	PMID:20089953
Biological Process	GO:0000413	protein peptidyl-prolyl isomerization	PPIB	IDA		Human	PMID:20676357
Biological Process	GO:0050821	protein stabilization	PPIB	IMP		Human	PMID:20089953

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern