Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PPME1
  • Mouse genes Ppme1
  • Rat genes Ppme1
  • Zfish genes ppme1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ppme1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	PPME1	HDA		Human	PMID:25468996
Molecular Function	GO:0106222	lncRNA binding	Ppme1	IDA		Mouse	PMID:31213650
Molecular Function	GO:0005515	protein binding	PPME1	IPI	UniProtKB:P67775-1	Human	PMID:22167190
Molecular Function	GO:0051722	protein C-terminal methylesterase activity	PPME1	IDA		Human	PMID:10318862
Molecular Function	GO:0019901	protein kinase binding	Ppme1	IPI	UniProtKB:Q9R1U5	Rat	PMID:17939993|RGD:8554378
Molecular Function	GO:0051721	protein phosphatase 2A binding	PPME1	IDA		Human	PMID:10318862
Molecular Function	GO:0019903	protein phosphatase binding	PPME1	IDA		Human	PMID:10318862
Biological Process	GO:0006482	protein demethylation	PPME1	IDA		Human	PMID:10318862
Biological Process	GO:0006468	protein phosphorylation	Ppme1	IMP	MGI:MGI:3577601	Mouse	PMID:31213650
Biological Process	GO:0032606	type I interferon production	Ppme1	IMP	MGI:MGI:3577601	Mouse	PMID:31213650

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern