Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PREB
  • Mouse genes Preb
  • Rat genes Preb
  • Zfish genes preb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Preb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051020	GTPase binding	Preb	IPI	UniProtKB:Q9CQC9	Mouse	MGI:MGI:5784996|PMID:11422940
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	Preb	IDA		Mouse	MGI:MGI:5784996|PMID:11422940
Molecular Function	GO:0005515	protein binding	PREB	IPI	UniProtKB:Q96PC5-7	Human	PMID:25202031
Molecular Function	GO:0005515	protein binding	PREB	IPI	UniProtKB:Q96PC5-7	Human	PMID:27170179
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Preb	IDA		Rat	PMID:10194769|RGD:61705
Cellular Component	GO:0070971	endoplasmic reticulum exit site	PREB	IDA		Human	PMID:25202031
Cellular Component	GO:0070971	endoplasmic reticulum exit site	PREB	IDA		Human	PMID:27170179
Cellular Component	GO:0070971	endoplasmic reticulum exit site	PREB	IDA		Human	PMID:28442536
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Preb	IDA		Rat	PMID:11422940|RGD:11344947
Cellular Component	GO:0016020	membrane	PREB	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	PREB	IDA		Human	PMID:10194769
Cellular Component	GO:0005634	nucleus	Preb	IDA		Rat	PMID:12371906|RGD:629541
Biological Process	GO:0048208	COPII vesicle coating	Preb	IDA		Rat	PMID:11422940|RGD:11344947
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Preb	IDA		Rat	PMID:11422940|RGD:11344947
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Preb	IDA		Rat	PMID:10194769|RGD:61705
Biological Process	GO:0032527	protein exit from endoplasmic reticulum	PREB	IMP		Human	PMID:25202031

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern