Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PRPF3
  • Mouse genes Prpf3
  • Rat genes Prpf3
  • Zfish genes prpf3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Prpf3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	PRPF3	IPI	UniProtKB:O43395	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q15020	Human	PMID:15314151
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q92997	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O43290	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O94906	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q15020	Human	PMID:20595234
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9UMS4	Human	PMID:20595234
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9HCM9	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O75940	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O95391	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:P26368	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:P55081	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8N5F7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O43172	Human	PMID:25383878
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9HCM9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O43242	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8IXK0-5	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8IZU0	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q96D09	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9HCM9-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9UJV3-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O43290	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O94906	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:A0A0C3SFZ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:P26368-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:P40222	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:P78356-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q15276	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q2KHN1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q6FI91	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q6ZUT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q86Z20	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8IZU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8NHQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8TBC3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q8WW38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q96RE7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9BWT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9H4L5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9HCM9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9UGI0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9Y250	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PRPF3	IPI	UniProtKB:Q9Y2D8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Prpf3	IPI	RGD:3075	Rat	PMID:21070191|RGD:10045882
Molecular Function	GO:0003723	RNA binding	PRPF3	HDA		Human	PMID:22681889
Cellular Component	GO:0015030	Cajal body	PRPF3	IDA		Human	PMID:15257298
Cellular Component	GO:0005829	cytosol	PRPF3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	PRPF3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PRPF3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PRPF3	IDA		Human	PMID:20595234
Cellular Component	GO:0005634	nucleus	PRPF3	IDA		Human	PMID:26912367
Cellular Component	GO:0005634	nucleus	PRPF3	IDA		Human	PMID:28781166
Cellular Component	GO:0005634	nucleus	Prpf3	IDA		Rat	PMID:21070191|RGD:10045882
Cellular Component	GO:0032991	protein-containing complex	Prpf3	IDA		Rat	PMID:21070191|RGD:10045882
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	PRPF3	IDA		Human	PMID:28781166
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	PRPF3	IDA		Human	PMID:26912367
Biological Process	GO:0000398	mRNA splicing, via spliceosome	PRPF3	IDA		Human	PMID:28781166
Biological Process	GO:0060041	retina development in camera-type eye	prpf3	IMP	ZFIN:ZDB-GENO-090112-1	Zfish	PMID:18552388
Biological Process	GO:0000244	spliceosomal tri-snRNP complex assembly	PRPF3	IDA		Human	PMID:20595234

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern