Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PRRT1
  • Mouse genes Prrt1
  • Rat genes Prrt1
  • Zfish genes prrt1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Prrt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030545	signaling receptor regulator activity	Prrt1	IDA		Mouse	PMID:29490264
Cellular Component	GO:0098978	glutamatergic synapse	Prrt1	IDA		Rat	PMID:26660156|RGD:13702344
Cellular Component	GO:0098839	postsynaptic density membrane	Prrt1	IDA		Mouse	PMID:29490264
Cellular Component	GO:0045211	postsynaptic membrane	Prrt1	IDA		Rat	PMID:26660156|RGD:13702344
Cellular Component	GO:0030672	synaptic vesicle membrane	Prrt1	IDA		Mouse	PMID:29490264
Biological Process	GO:0007611	learning or memory	Prrt1	IMP	MGI:3812714	Mouse	PMID:29490264
Biological Process	GO:0060292	long-term synaptic depression	Prrt1	IMP		Mouse	MGI:MGI:6446632|PMID:31216424
Biological Process	GO:0060291	long-term synaptic potentiation	Prrt1	IMP	MGI:3812714	Mouse	PMID:29490264
Biological Process	GO:0008104	protein localization	Prrt1	IMP	MGI:3812714	Mouse	PMID:29490264
Biological Process	GO:0034394	protein localization to cell surface	Prrt1	IMP		Mouse	MGI:MGI:6446632|PMID:31216424
Biological Process	GO:0006468	protein phosphorylation	Prrt1	IMP		Mouse	MGI:MGI:6446632|PMID:31216424
Biological Process	GO:2000311	regulation of AMPA receptor activity	Prrt1	IMP		Mouse	MGI:MGI:6446632|PMID:31216424
Biological Process	GO:2000311	regulation of AMPA receptor activity	Prrt1	IDA		Mouse	PMID:29490264
Biological Process	GO:0050808	synapse organization	Prrt1	IMP	MGI:3812714	Mouse	PMID:29490264

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern