Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSIP1
  • Mouse genes Psip1
  • Rat genes Psip1
  • Zfish genes psip1a,psip1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:P04585	Human	PMID:21156026
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:P63165	Human	PMID:22748127
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q99708	Human	PMID:22773103
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q03164	Human	PMID:25082813
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q7Z3K3	Human	PMID:25082813
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q96GN5	Human	PMID:25082813
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q03164	Human	PMID:25305204
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q03164	Human	PMID:29997176
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q15648	Human	PMID:29997176
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q7Z3K3	Human	PMID:29997176
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q96GN5	Human	PMID:29997176
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q96ST2	Human	PMID:29997176
Molecular Function	GO:0005515	protein binding	PSIP1	IPI	UniProtKB:Q9UBU7	Human	PMID:29997176
Molecular Function	GO:0003723	RNA binding	PSIP1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PSIP1	HDA		Human	PMID:22681889
Molecular Function	GO:0097100	supercoiled DNA binding	Psip1	IDA		Rat	PMID:21345933|RGD:8554215
Cellular Component	GO:0000791	euchromatin	Psip1	IDA		Rat	PMID:21345933|RGD:8554215
Cellular Component	GO:0000792	heterochromatin	Psip1	IDA		Rat	PMID:21345933|RGD:8554215
Cellular Component	GO:0005654	nucleoplasm	PSIP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0000395	mRNA 5'-splice site recognition	PSIP1	IDA		Human	PMID:9885563
Biological Process	GO:0009408	response to heat	Psip1	IDA		Mouse	MGI:MGI:5142385|PMID:11027629
Biological Process	GO:0006979	response to oxidative stress	Psip1	IDA		Mouse	MGI:MGI:5142385|PMID:11027629

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern