Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMB9
  • Mouse genes Psmb9
  • Rat genes Psmb9
  • Zfish genes psmb9a,psmb9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmb9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070628	proteasome binding	Psmb9	IDA		Rat	PMID:11295489|RGD:9854635
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q99436	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9Y244	Human	PMID:14733938
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q15788	Human	PMID:16957778
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9Y3R0	Human	PMID:16957778
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9Y6Q9	Human	PMID:16957778
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9WMX2:PRO_0000037548	Human	PMID:18985028
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9WMX2:PRO_0000037551	Human	PMID:18985028
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q99436	Human	PMID:20723761
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q99436	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9Y244	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q99436	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q9Y244	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q14657	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q24JT5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMB9	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Cellular Component	GO:0005829	cytosol	PSMB9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	Psmb9	IDA		Rat	PMID:19230868|RGD:9854626
Cellular Component	GO:0070062	extracellular exosome	PSMB9	HDA		Human	PMID:20458337
Cellular Component	GO:0000502	proteasome complex	Psmb9	IDA		Rat	PMID:11295489|RGD:9854635
Cellular Component	GO:0005839	proteasome core complex	Psmb9	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0005839	proteasome core complex	Psmb9	IDA		Mouse	PMID:17540904
Cellular Component	GO:1990111	spermatoproteasome complex	Psmb9	IDA		Mouse	MGI:MGI:5494329|PMID:23706739
Biological Process	GO:0019882	antigen processing and presentation	Psmb9	IMP	MGI:MGI:2152729	Mouse	PMID:15356141
Biological Process	GO:0019882	antigen processing and presentation	Psmb9	IDA		Mouse	PMID:15356141
Biological Process	GO:0071257	cellular response to electrical stimulus	Psmb9	IEP		Rat	PMID:10051633|RGD:7242894
Biological Process	GO:0071347	cellular response to interleukin-1	Psmb9	IEP		Rat	PMID:22612225|RGD:9850286
Biological Process	GO:0071222	cellular response to lipopolysaccharide	psmb9a	IDA		Zfish	PMID:31900206
Biological Process	GO:0071219	cellular response to molecule of bacterial origin	psmb9a	IDA		Zfish	PMID:31900206
Biological Process	GO:0098586	cellular response to virus	Psmb9	IEP		Rat	PMID:9001385|RGD:9850285
Biological Process	GO:0001889	liver development	Psmb9	IEP		Rat	PMID:24707720|RGD:9854625
Biological Process	GO:0014889	muscle atrophy	Psmb9	IEP		Rat	PMID:14678786|RGD:9854636
Biological Process	GO:2000116	regulation of cysteine-type endopeptidase activity	PSMB9	IMP		Human	PMID:26524591
Biological Process	GO:0043279	response to alkaloid	Psmb9	IEP		Rat	PMID:16988215|RGD:2303051
Biological Process	GO:0009617	response to bacterium	Psmb9	IEP		Mouse	PMID:23012479
Biological Process	GO:1901423	response to benzene	Psmb9	IEP		Rat	PMID:16988215|RGD:2303051
Biological Process	GO:1901698	response to nitrogen compound	psmb9a	IDA		Zfish	PMID:31900206
Biological Process	GO:0014070	response to organic cyclic compound	psmb9a	IDA		Zfish	PMID:31900206
Biological Process	GO:0009410	response to xenobiotic stimulus	Psmb9	IEP		Rat	PMID:16452686|RGD:9850283
Biological Process	GO:0048536	spleen development	Psmb9	IEP		Rat	PMID:24707720|RGD:9854625
Biological Process	GO:0048538	thymus development	Psmb9	IEP		Rat	PMID:18457575|RGD:9850287

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern