Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMC3
  • Mouse genes Psmc3
  • Rat genes Psmc3
  • Zfish genes psmc3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmc3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	PSMC3	IPI	UniProtKB:P17980	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	PSMC3	IPI	UniProtKB:P17980	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P03255-1	Human	PMID:16763564
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O00233	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9Y2J4	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:A8K2R3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O00233	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9Y2J4-4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:27342858
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9BUZ4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9NVF7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:29636472
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O00233	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O00233	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O14561	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P12532	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P62333	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9BUZ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9C005	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9NVF7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q9Y2J4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:O43464	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC3	IPI	UniProtKB:Q14203-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Psmc3	IPI	RGD:3729	Rat	PMID:11032911|RGD:2291798
Molecular Function	GO:0005515	protein binding	Psmc3	IPI	UniProtKB:A0A0G2K916,UniProtKB:B2GV38,UniProtKB:B5DFN4,UniProtKB:D3Z941,UniProtKB:D4AA63,UniProtKB:F1M853,UniProtKB:P11250,UniProtKB:P51593,UniProtKB:P61107,UniProtKB:P62718,UniProtKB:P97612,UniProtKB:Q09167,UniProtKB:Q498M4,UniProtKB:Q5PPJ6,UniProtKB:Q5PPK9,UniProtKB:Q6AYJ7	Rat	PMID:27191843|RGD:11344934
Cellular Component	GO:0005737	cytoplasm	Psmc3	IDA		Rat	PMID:11032911|RGD:2291798
Cellular Component	GO:0016020	membrane	PSMC3	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	PSMC3	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	PSMC3	IDA		Human	PMID:2194290
Cellular Component	GO:0000932	P-body	Psmc3	IDA		Mouse	MGI:MGI:5487513|PMID:22078707
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Psmc3	IDA		Rat	PMID:11032911|RGD:2291798
Cellular Component	GO:0022624	proteasome accessory complex	Psmc3	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0000502	proteasome complex	PSMC3	IDA		Human	PMID:17323924
Cellular Component	GO:0000502	proteasome complex	PSMC3	IDA		Human	PMID:9464850
Biological Process	GO:0001824	blastocyst development	Psmc3	IMP	MGI:MGI:2180548	Mouse	PMID:10945464
Biological Process	GO:0002088	lens development in camera-type eye	psmc3	IMP	ZFIN:ZDB-CRISPR-210222-3	Zfish	PMID:32500975
Biological Process	GO:0002088	lens development in camera-type eye	psmc3	IMP	ZFIN:ZDB-MRPHLNO-210222-2	Zfish	PMID:32500975
Biological Process	GO:0002088	lens development in camera-type eye	psmc3	IMP	ZFIN:ZDB-CRISPR-210222-4	Zfish	PMID:32500975
Biological Process	GO:0043921	modulation by host of viral transcription	PSMC3	IDA		Human	PMID:2194290
Biological Process	GO:0043921	modulation by host of viral transcription	PSMC3	IDA		Human	PMID:8419915
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	PSMC3	IDA		Human	PMID:19853614
Biological Process	GO:0060879	semicircular canal fusion	psmc3	IMP	ZFIN:ZDB-CRISPR-210222-3	Zfish	PMID:32500975
Biological Process	GO:0060879	semicircular canal fusion	psmc3	IMP	ZFIN:ZDB-MRPHLNO-210222-2	Zfish	PMID:32500975
Biological Process	GO:0060879	semicircular canal fusion	psmc3	IMP	ZFIN:ZDB-CRISPR-210222-4	Zfish	PMID:32500975

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern