Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMC4
  • Mouse genes Psmc4
  • Rat genes Psmc4
  • Zfish genes psmc4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmc4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:12525503
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62195	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:Q9Z2X2	Human	PMID:17292836
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62191	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62195	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62333	Human	PMID:19490896
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:Q0PF16	Human	PMID:22078707
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:24338975
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62191	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62333	Human	PMID:27342858
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P36957	Human	PMID:29128334
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62333	Human	PMID:29636472
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:Q8TCF1	Human	PMID:29804830
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62195	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:O75832	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P62195	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P27797	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:P36957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PSMC4	IPI	UniProtKB:Q8TDX7	Human	PMID:32814053
Cellular Component	GO:0005829	cytosol	PSMC4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031597	cytosolic proteasome complex	Psmc4	IDA		Rat	PMID:18986984|RGD:7242199
Cellular Component	GO:0016234	inclusion body	Psmc4	IDA		Rat	PMID:18986984|RGD:7242199
Cellular Component	GO:0016020	membrane	PSMC4	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	PSMC4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PSMC4	HDA		Human	PMID:21630459
Cellular Component	GO:0022624	proteasome accessory complex	Psmc4	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0000502	proteasome complex	PSMC4	IDA		Human	PMID:17323924
Cellular Component	GO:0045202	synapse	Psmc4	IDA		Rat	PMID:16810255|RGD:12050100
Biological Process	GO:0001824	blastocyst development	Psmc4	IMP	MGI:MGI:2180553	Mouse	PMID:10945464

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern