Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMD6
  • Mouse genes Psmd6
  • Rat genes Psmd6
  • Zfish genes psmd6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmd6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PSMD6	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMD6	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PSMD6	IPI	UniProtKB:Q96FZ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMD6	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Cellular Component	GO:0022624	proteasome accessory complex	Psmd6	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0000502	proteasome complex	PSMD6	IDA		Human	PMID:17323924
Biological Process	GO:0070306	lens fiber cell differentiation	psmd6	IMP	ZFIN:ZDB-GENO-101015-3	Zfish	PMID:20724448
Biological Process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	psmd6	IMP	ZFIN:ZDB-GENO-101015-3	Zfish	PMID:20724448

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern