Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTCD2
  • Mouse genes Ptcd2
  • Rat genes Ptcd2
  • Zfish genes ptcd2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptcd2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PTCD2	IPI	UniProtKB:O15344	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTCD2	IPI	UniProtKB:Q13049	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTCD2	IPI	UniProtKB:Q70CQ1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTCD2	IPI	UniProtKB:Q9UJV3-2	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	PTCD2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PTCD2	HDA		Human	PMID:22681889
Cellular Component	GO:0005739	mitochondrion	PTCD2	IDA		Human	PMID:18729827
Cellular Component	GO:0005739	mitochondrion	Ptcd2	HDA		Mouse	PMID:18614015
Biological Process	GO:0007507	heart development	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0001822	kidney development	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0001889	liver development	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0007005	mitochondrion organization	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0055001	muscle cell development	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0010468	regulation of gene expression	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0050684	regulation of mRNA processing	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827
Biological Process	GO:0055010	ventricular cardiac muscle tissue morphogenesis	Ptcd2	IMP	MGI:MGI:3830811	Mouse	PMID:18729827

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern