Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTPN13
  • Mouse genes Ptpn13
  • Rat genes Ptpn13
  • Zfish genes ptpn13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptpn13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0036312	phosphatidylinositol 3-kinase regulatory subunit binding	PTPN13	IPI	UniProtKB:O00459	Human	PMID:23604317
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q15654	Human	PMID:10826496
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:P25445	Human	PMID:10918185
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q16513	Human	PMID:11356191
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q8TEU7	Human	PMID:12095257
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:P25445	Human	PMID:12724420
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q9ERS5	Human	PMID:14516276
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q9HB21	Human	PMID:14516276
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q8TEU7	Human	PMID:14698303
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q8TEU7	Human	PMID:17240990
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q9BUL8	Human	PMID:17657516
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:P17927	Human	PMID:18684861
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:P50479	Human	PMID:19307596
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q96C92	Human	PMID:23108400
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q9UKC9	Human	PMID:23604317
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q8R464	Human	PMID:23611113
Molecular Function	GO:0005515	protein binding	PTPN13	IPI	UniProtKB:Q13501	Human	PMID:24316673
Molecular Function	GO:0005515	protein binding	Ptpn13	IPI	UniProtKB:P70271|UniProtKB:Q9Z1Y4	Mouse	MGI:MGI:5509005|PMID:10826496
Molecular Function	GO:0005515	protein binding	Ptpn13	IPI	UniProtKB:P70271	Mouse	MGI:MGI:6103273|PMID:15663004
Molecular Function	GO:0005515	protein binding	Ptpn13	IPI	PR:O88665	Mouse	PMID:10526152
Molecular Function	GO:0005515	protein binding	Ptpn13	IPI	PR:Q9DCT8	Mouse	PMID:12839623
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	PTPN13	IDA		Human	PMID:14516276
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	PTPN13	IDA		Human	PMID:15611135
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	PTPN13	IDA		Human	PMID:19307596
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	PTPN13	IMP		Human	PMID:23604317
Cellular Component	GO:0044297	cell body	Ptpn13	IDA		Rat	PMID:18096138|RGD:4142863
Cellular Component	GO:0005737	cytoplasm	PTPN13	IDA		Human	PMID:14516276
Cellular Component	GO:0005737	cytoplasm	Ptpn13	IDA		Mouse	PMID:10526152
Cellular Component	GO:0005829	cytosol	PTPN13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	PTPN13	HDA		Human	PMID:19056867
Cellular Component	GO:0001650	fibrillar center	PTPN13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030027	lamellipodium	PTPN13	IDA		Human	PMID:11356191
Cellular Component	GO:0030496	midbody	Ptpn13	IDA		Mouse	MGI:MGI:5613463|PMID:23108400
Cellular Component	GO:0043005	neuron projection	Ptpn13	IDA		Rat	PMID:18096138|RGD:4142863
Cellular Component	GO:0005654	nucleoplasm	PTPN13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PTPN13	IDA		Human	PMID:10826496
Cellular Component	GO:0005634	nucleus	PTPN13	IDA		Human	PMID:11356191
Cellular Component	GO:0005634	nucleus	Ptpn13	IDA		Mouse	PMID:10526152
Cellular Component	GO:0005886	plasma membrane	PTPN13	IDA		Human	PMID:14516276
Biological Process	GO:0097237	cellular response to toxic substance	Ptpn13	IEP		Rat	PMID:10022303|RGD:152975630
Biological Process	GO:1904890	negative regulation of excitatory synapse assembly	Ptpn13	IDA		Rat	PMID:23769722|RGD:152975632
Biological Process	GO:0001933	negative regulation of protein phosphorylation	PTPN13	IMP		Human	PMID:25893857
Biological Process	GO:0001933	negative regulation of protein phosphorylation	Ptpn13	IDA		Rat	PMID:23769722|RGD:152975632
Biological Process	GO:0035335	peptidyl-tyrosine dephosphorylation	PTPN13	IMP		Human	PMID:23604317
Biological Process	GO:0006470	protein dephosphorylation	PTPN13	IDA		Human	PMID:17657516
Biological Process	GO:0006470	protein dephosphorylation	PTPN13	IDA		Human	PMID:19307596
Biological Process	GO:0014066	regulation of phosphatidylinositol 3-kinase signaling	PTPN13	IDA		Human	PMID:23604317

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern