Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTPN7
  • Mouse genes Ptpn7
  • Rat genes Ptpn7
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptpn7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:P28482	Human	PMID:10415025
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:P47811	Human	PMID:10415025
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:P47811	Human	PMID:12583813
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:P28482	Human	PMID:12592337
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:P28482	Human	PMID:25241761
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:Q2TAC2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PTPN7	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Cellular Component	GO:0005737	cytoplasm	PTPN7	IDA		Human	PMID:10940933
Cellular Component	GO:0005737	cytoplasm	PTPN7	IDA		Human	PMID:14613483
Cellular Component	GO:0009898	cytoplasmic side of plasma membrane	PTPN7	IDA		Human	PMID:10940933
Cellular Component	GO:0005829	cytosol	PTPN7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	PTPN7	IDA		Human	PMID:10940933
Cellular Component	GO:0005829	cytosol	Ptpn7	IDA		Rat	PMID:7545170|RGD:1299496
Cellular Component	GO:0015630	microtubule cytoskeleton	PTPN7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0072686	mitotic spindle	PTPN7	IDA		Human	GO_REF:0000052
Biological Process	GO:0006470	protein dephosphorylation	Ptpn7	IMP	MGI:MGI:2178956	Mouse	PMID:11564869

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern