Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PVALB
  • Mouse genes Pvalb
  • Rat genes Pvalb
  • Zfish genes pvalb6,pvalb7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pvalb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Pvalb	IDA		Rat	PMID:15323551|RGD:7175524
Molecular Function	GO:0005509	calcium ion binding	Pvalb	IDA		Rat	PMID:19651438|RGD:7175522
Molecular Function	GO:0042802	identical protein binding	Pvalb	IPI	RGD:3457	Rat	PMID:15323551|RGD:7175524
Molecular Function	GO:0044877	protein-containing complex binding	Pvalb	IDA		Rat	PMID:15323551|RGD:7175524
Cellular Component	GO:0030424	axon	Pvalb	IDA		Mouse	PMID:15479642
Cellular Component	GO:0030424	axon	Pvalb	IDA		Mouse	PMID:12149208
Cellular Component	GO:0032437	cuticular plate	Pvalb	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005737	cytoplasm	Pvalb	IDA		Mouse	PMID:12716955
Cellular Component	GO:0005737	cytoplasm	Pvalb	IDA		Mouse	PMID:12115678
Cellular Component	GO:0005737	cytoplasm	Pvalb	IDA		Mouse	PMID:16040009
Cellular Component	GO:0005737	cytoplasm	Pvalb	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005737	cytoplasm	Pvalb	IDA		Rat	PMID:8873965|RGD:7175525
Cellular Component	GO:0043025	neuronal cell body	Pvalb	IDA		Rat	PMID:10526316|RGD:8655605
Cellular Component	GO:0005634	nucleus	Pvalb	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0032991	protein-containing complex	Pvalb	IDA		Rat	PMID:15323551|RGD:7175524
Cellular Component	GO:0032420	stereocilium	Pvalb	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0043195	terminal bouton	Pvalb	HDA		Rat	PMID:24876496|RGD:10047219
Biological Process	GO:0090102	cochlea development	Pvalb	IEP		Rat	PMID:16120789|RGD:7175527
Biological Process	GO:0098976	excitatory chemical synaptic transmission	Pvalb	IMP	MGI:MGI:3590684	Mouse	PMID:30679017
Biological Process	GO:0010467	gene expression	Pvalb	IMP	MGI:MGI:2652272	Mouse	PMID:30116174
Biological Process	GO:0098977	inhibitory chemical synaptic transmission	Pvalb	IMP	MGI:MGI:3590684	Mouse	PMID:30679017

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern