Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB13
  • Mouse genes Rab13
  • Rat genes Rab13
  • Zfish genes rab13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005525	GTP binding	RAB13	IDA		Human	PMID:20937701
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:Q3TN34	Human	PMID:16525024
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:Q3TN34	Human	PMID:18332111
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:Q3TN34	Human	PMID:20008558
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:Q8N3F8	Human	PMID:21795389
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:Q6PDU4	Human	PMID:23772379
Molecular Function	GO:0005515	protein binding	RAB13	IPI	UniProtKB:O43924	Human	PMID:9712853
Molecular Function	GO:0005515	protein binding	Rab13	IPI	UniProtKB:Q6PDU4	Rat	PMID:23772379|RGD:8554321
Molecular Function	GO:0034236	protein kinase A catalytic subunit binding	Rab13	IPI	UniProtKB:P27791	Rat	PMID:23419316|RGD:8554106
Cellular Component	GO:0005923	bicellular tight junction	RAB13	IDA		Human	PMID:12058051
Cellular Component	GO:0005923	bicellular tight junction	RAB13	IDA		Human	PMID:8294494
Cellular Component	GO:0005923	bicellular tight junction	Rab13	IDA		Mouse	PMID:11025210
Cellular Component	GO:0005911	cell-cell junction	Rab13	IDA		Mouse	PMID:11025210
Cellular Component	GO:0031410	cytoplasmic vesicle	RAB13	IDA		Human	PMID:8294494
Cellular Component	GO:0005829	cytosol	RAB13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030139	endocytic vesicle	RAB13	IDA		Human	PMID:15528189
Cellular Component	GO:0030139	endocytic vesicle	Rab13	IDA		Mouse	MGI:MGI:5508725|PMID:21543326
Cellular Component	GO:0070062	extracellular exosome	RAB13	HDA		Human	PMID:19056867
Cellular Component	GO:0005794	Golgi apparatus	Rab13	IDA		Mouse	PMID:11042173
Cellular Component	GO:0032593	insulin-responsive compartment	Rab13	IDA		Rat	PMID:21041651|RGD:8554419
Cellular Component	GO:0030027	lamellipodium	Rab13	IDA		Mouse	MGI:MGI:5508725|PMID:21543326
Cellular Component	GO:0016328	lateral plasma membrane	RAB13	IDA		Human	PMID:12058051
Cellular Component	GO:0043005	neuron projection	RAB13	IDA		Human	PMID:20008558
Cellular Component	GO:0005886	plasma membrane	RAB13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	RAB13	IDA		Human	PMID:15528189
Cellular Component	GO:0005886	plasma membrane	RAB13	IDA		Human	PMID:18779367
Cellular Component	GO:0055037	recycling endosome	RAB13	IDA		Human	PMID:18779367
Cellular Component	GO:0005802	trans-Golgi network	RAB13	IDA		Human	PMID:18779367
Biological Process	GO:0001525	angiogenesis	rab13	IMP	ZFIN:ZDB-MRPHLNO-110727-4	Zfish	PMID:21543326
Biological Process	GO:0001525	angiogenesis	rab13	IMP	ZFIN:ZDB-MRPHLNO-110727-3	Zfish	PMID:21543326
Biological Process	GO:0070830	bicellular tight junction assembly	RAB13	IMP		Human	PMID:12058051
Biological Process	GO:0070830	bicellular tight junction assembly	RAB13	IMP		Human	PMID:15096524
Biological Process	GO:0048514	blood vessel morphogenesis	rab13	IMP	ZFIN:ZDB-GENO-221020-1	Zfish	PMID:32946121
Biological Process	GO:0032869	cellular response to insulin stimulus	Rab13	IMP		Rat	PMID:21041651|RGD:8554419
Biological Process	GO:0030866	cortical actin cytoskeleton organization	Rab13	IMP		Rat	PMID:23419316|RGD:8554106
Biological Process	GO:0032456	endocytic recycling	RAB13	IMP		Human	PMID:15528189
Biological Process	GO:0032456	endocytic recycling	Rab13	IMP		Mouse	MGI:MGI:5508273|PMID:15528189
Biological Process	GO:0016197	endosomal transport	RAB13	IMP		Human	PMID:18779367
Biological Process	GO:0035767	endothelial cell chemotaxis	Rab13	IMP		Mouse	MGI:MGI:5508725|PMID:21543326
Biological Process	GO:0097368	establishment of Sertoli cell barrier	Rab13	IMP		Rat	PMID:23419316|RGD:8554106
Biological Process	GO:0031175	neuron projection development	RAB13	IMP		Human	PMID:20008558
Biological Process	GO:0031175	neuron projection development	Rab13	IMP		Rat	PMID:20008558|RGD:8553724
Biological Process	GO:0010737	protein kinase A signaling	RAB13	IMP		Human	PMID:15096524
Biological Process	GO:0010737	protein kinase A signaling	Rab13	IMP		Rat	PMID:23419316|RGD:8554106
Biological Process	GO:1902463	protein localization to cell leading edge	Rab13	IMP		Mouse	MGI:MGI:5508725|PMID:21543326
Biological Process	GO:0072659	protein localization to plasma membrane	RAB13	IMP		Human	PMID:15096524
Biological Process	GO:0072659	protein localization to plasma membrane	Rab13	IDA		Rat	PMID:21041651|RGD:8554419

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern