Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB29
  • Mouse genes Rab29
  • Rat genes Rab29
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab29

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070840	dynein complex binding	RAB29	IDA		Human	PMID:26021297
Molecular Function	GO:0019003	GDP binding	RAB29	IDA		Human	PMID:24510904
Molecular Function	GO:0019003	GDP binding	Rab29	IDA		Rat	PMID:9177482|RGD:633763
Molecular Function	GO:0005525	GTP binding	RAB29	IDA		Human	PMID:24510904
Molecular Function	GO:0005525	GTP binding	Rab29	IDA		Mouse	PMID:24510904
Molecular Function	GO:0005525	GTP binding	Rab29	IDA		Rat	PMID:9177482|RGD:633763
Molecular Function	GO:0019894	kinesin binding	RAB29	IPI	UniProtKB:Q9Y496	Human	PMID:26021297
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:Q5S007	Human	PMID:24510904
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:Q8IY31	Human	PMID:26021297
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:O95751	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:Q5S007	Human	PMID:31552791
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:O95751	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:P14373	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAB29	IPI	UniProtKB:Q13049	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rab29	IPI	PR:Q5S006	Mouse	PMID:24510904
Molecular Function	GO:0005515	protein binding	Rab29	IPI	UniProtKB:Q5S007	Rat	PMID:23395371|RGD:8553873
Molecular Function	GO:0031267	small GTPase binding	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0005801	cis-Golgi network	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0005737	cytoplasm	RAB29	IDA		Human	PMID:24788816
Cellular Component	GO:0005829	cytosol	RAB29	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005769	early endosome	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0070062	extracellular exosome	RAB29	HDA		Human	PMID:19056867
Cellular Component	GO:0005794	Golgi apparatus	RAB29	IDA		Human	PMID:22042847
Cellular Component	GO:0005794	Golgi apparatus	Rab29	IDA		Mouse	PMID:24510904
Cellular Component	GO:0005794	Golgi apparatus	Rab29	IDA		Rat	PMID:23395371|RGD:8553873
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RAB29	IDA		Human	GO_REF:0000052
Cellular Component	GO:0097708	intracellular vesicle	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0005739	mitochondrion	RAB29	IDA		Human	PMID:25767741
Cellular Component	GO:0055037	recycling endosome	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0005802	trans-Golgi network	RAB29	IDA		Human	PMID:24510904
Cellular Component	GO:0005802	trans-Golgi network	RAB29	IDA		Human	PMID:24788816
Cellular Component	GO:0005802	trans-Golgi network	RAB29	IDA		Human	PMID:26021297
Cellular Component	GO:0005773	vacuole	RAB29	IDA		Human	PMID:22042847
Cellular Component	GO:0031982	vesicle	Rab29	IDA		Mouse	PMID:24510904
Biological Process	GO:0060271	cilium assembly	Rab29	IMP		Mouse	MGI:MGI:5795797|PMID:26021297
Biological Process	GO:0007030	Golgi organization	RAB29	IMP		Human	PMID:24510904
Biological Process	GO:0007030	Golgi organization	RAB29	IMP		Human	PMID:24788816
Biological Process	GO:0007030	Golgi organization	Rab29	IGI	MGI:MGI:1913975	Mouse	PMID:24510904
Biological Process	GO:0007005	mitochondrion organization	RAB29	IMP		Human	PMID:25767741
Biological Process	GO:0044788	modulation by host of viral process	RAB29	IMP		Human	PMID:19376974
Biological Process	GO:0010977	negative regulation of neuron projection development	RAB29	IDA		Human	PMID:24510904
Biological Process	GO:0090316	positive regulation of intracellular protein transport	RAB29	IMP		Human	PMID:24788816
Biological Process	GO:0001921	positive regulation of receptor recycling	RAB29	IMP		Human	PMID:26021297
Biological Process	GO:0050862	positive regulation of T cell receptor signaling pathway	RAB29	IMP		Human	PMID:26021297
Biological Process	GO:1903441	protein localization to ciliary membrane	Rab29	IMP		Mouse	MGI:MGI:5795797|PMID:26021297
Biological Process	GO:0072657	protein localization to membrane	RAB29	IMP		Human	PMID:25767741
Biological Process	GO:1905279	regulation of retrograde transport, endosome to Golgi	Rab29	IMP	UniProtKB:Q96QK1	Rat	PMID:23395371|RGD:8553873
Biological Process	GO:0009617	response to bacterium	RAB29	IDA		Human	PMID:22042847
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	RAB29	IMP		Human	PMID:24788816
Biological Process	GO:0007416	synapse assembly	RAB29	IMP		Human	PMID:26021297
Biological Process	GO:0042110	T cell activation	RAB29	IMP		Human	PMID:26021297
Biological Process	GO:1901998	toxin transport	RAB29	IMP		Human	PMID:22042847

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern