Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB3IP
  • Mouse genes Rab3ip
  • Rat genes Rab3ip
  • Zfish genes rab3ip
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab3ip

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051020	GTPase binding	Rab3ip	IPI	RGD:3528	Rat	PMID:7532276|RGD:633748
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	RAB3IP	IDA		Human	PMID:20937701
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	Rab3ip	IDA		Rat	PMID:12221131|RGD:11534981
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q16385	Human	PMID:12007189
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8TBN0	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8TBN0	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:O75865	Human	PMID:21273506
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P48553	Human	PMID:21273506
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P61006	Human	PMID:21273506
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:M0R2J8	Human	PMID:22159412
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:O60437	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:O60568	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:O75865	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P20336	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P31947	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P41227	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q16385	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q86V42	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q86VK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8N9N5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8TBN0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q96T51	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q9NX63	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P61006	Human	PMID:26824392
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P48553	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:P61006	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8TBN0	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:O60568	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RAB3IP	IPI	UniProtKB:Q8WVR3	Human	PMID:31467083
Molecular Function	GO:0005515	protein binding	Rab3ip	IPI	UniProtKB:P62492	Rat	PMID:23435566|RGD:8693350
Molecular Function	GO:0005515	protein binding	Rab3ip	IPI	UniProtKB:Q8R313	Rat	PMID:23435566|RGD:8693350
Molecular Function	GO:0005515	protein binding	Rab3ip	IPI	RGD:620924	Rat	PMID:7532276|RGD:633748
Molecular Function	GO:0005515	protein binding	Rab3ip	IPI	UniProtKB:P63012	Rat	PMID:7532276|RGD:633748
Molecular Function	GO:0005515	protein binding	Rab3ip	IPI	UniProtKB:Q63942	Rat	PMID:7532276|RGD:633748
Cellular Component	GO:0005829	cytosol	RAB3IP	IDA		Human	PMID:12007189
Cellular Component	GO:0005829	cytosol	Rab3ip	IDA		Rat	PMID:7532276|RGD:633748
Cellular Component	GO:0005794	Golgi apparatus	Rab3ip	IDA		Rat	PMID:22445341|RGD:11534980
Cellular Component	GO:0005634	nucleus	RAB3IP	IDA		Human	PMID:12007189
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Rab3ip	IDA		Rat	PMID:22445341|RGD:11534980
Cellular Component	GO:1990635	proximal dendrite	Rab3ip	IDA		Rat	PMID:22445341|RGD:11534980
Biological Process	GO:0070121	Kupffer's vesicle development	rab3ip	IMP	ZFIN:ZDB-MRPHLNO-110323-1	Zfish	PMID:21273506
Biological Process	GO:0032402	melanosome transport	rab3ip	IMP	ZFIN:ZDB-MRPHLNO-110323-1	Zfish	PMID:21273506
Biological Process	GO:0051490	negative regulation of filopodium assembly	Rab3ip	IMP		Rat	PMID:22445341|RGD:11534980
Biological Process	GO:0006612	protein targeting to membrane	RAB3IP	IDA		Human	PMID:23382462

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern