Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB40A,RAB40AL,RAB40B
  • Mouse genes Rab40b
  • Rat genes Rab40b
  • Zfish genes rab40b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab40b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RAB40B	IPI	UniProtKB:O95967	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	RAB40AL	IDA		Human	PMID:22581972
Cellular Component	GO:0005794	Golgi apparatus	RAB40A	IDA		Human	PMID:34469730
Cellular Component	GO:0005811	lipid droplet	RAB40A	IDA		Human	PMID:34469730
Cellular Component	GO:0005739	mitochondrion	RAB40AL	IDA		Human	PMID:22581972
Cellular Component	GO:0005635	nuclear envelope	RAB40B	IDA		Human	PMID:22042847
Cellular Component	GO:0048471	perinuclear region of cytoplasm	RAB40B	IDA		Human	PMID:22042847
Biological Process	GO:1901998	toxin transport	RAB40B	IMP		Human	PMID:22042847

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern