Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB5IF
  • Mouse genes Rab5if
  • Rat genes Rab5if
  • Zfish genes rab5if
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab5if

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:O00217	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:O00483	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:O75489	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:P15954	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:P20674	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:P22695	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:P49821	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	RAB5IF	IPI	UniProtKB:Q16795	Human	PMID:31536960
Molecular Function	GO:0005515	protein binding	Rab5if	IPI	UniProtKB:P12787|UniProtKB:P17665|UniProtKB:Q62425|UniProtKB:Q8K3J1|UniProtKB:Q91YT0|UniProtKB:Q9DB77|UniProtKB:Q9DC69|UniProtKB:Q9DCT2	Mouse	MGI:MGI:6383486|PMID:31536960
Cellular Component	GO:0005746	mitochondrial respirasome	RAB5IF	IMP		Human	PMID:31536960
Cellular Component	GO:0005746	mitochondrial respirasome	Rab5if	IMP		Mouse	MGI:MGI:6383486|PMID:31536960
Cellular Component	GO:0005739	mitochondrion	Rab5if	HDA		Mouse	PMID:18614015
Cellular Component	GO:0160064	multi-pass translocon complex	RAB5IF	IDA		Human	PMID:36261522
Biological Process	GO:0097250	mitochondrial respirasome assembly	RAB5IF	IMP		Human	PMID:31536960
Biological Process	GO:0097250	mitochondrial respirasome assembly	Rab5if	IMP		Mouse	MGI:MGI:6383486|PMID:31536960
Biological Process	GO:0160063	multi-pass transmembrane protein insertion into ER membrane	RAB5IF	IDA		Human	PMID:36261522

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern